hypothesis-generate-debate

hypothesis-generate-debate is a skill for Claude Code, Codex from panjose/Co-Scientist. It costs 18 tokens per session (807 once invoked), scanned A, original, Apache-2.0.

A structured debate step that produces one research hypothesis candidate.

In plain words
What is it for?
Use it to generate a single hypothesis, its explanation and origin records, and a trace of the debate that produced it.
Why use it?
It makes the proposal address the research goal, explicit preferences, hard constraints, and unresolved weaknesses in any parent idea.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to generate a single hypothesis, its explanation and origin records, and a trace of the debate that produced it.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/panjose/co-scientist/hypothesis-generate-debate
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add panjose/Co-Scientist --skill hypothesis-generate-debate
Clone the repo
git clone --depth 1 https://github.com/panjose/Co-Scientist

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for hypothesis-generate-debate

README.md
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Your own site
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Per session 18 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 807 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00018 $0.00807
Opus 5 $0.00009 $0.00404
Sonnet 5 $0.00004 $0.00161
Haiku 4.5 $0.00002 $0.00081

Measured 10d ago against content hash 80ec1ba4fa39, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-10, from the pricing page.

Security

Grade A, and why

hypothesis-generate-debate scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 10d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/hypothesis-generate-debate/SKILL.md · 80 lines

What it actually says

hypothesis-generate-debate

Goal:

  • Generate exactly one hypothesis candidate through a structured scientific debate.

Inputs:

  • research_plan/RESEARCH_PLAN.json
  • state/STRATEGY_PLAN.json
  • optional parent hypothesis and review artifacts when the round is part of an evolution continuation

Outputs:

  • hypotheses/<id>/HYPOTHESIS.json
  • hypotheses/<id>/HYPOTHESIS.md
  • hypotheses/<id>/ORIGIN.json
  • debate transcript in the skill trace

Context Loading:

  • Read research_plan/RESEARCH_PLAN.json.
  • Treat research_goal as the debate objective.
  • Treat preferences as the criteria for what counts as a strong hypothesis.
  • Treat constraints as hard boundaries that cannot be violated in the final proposal.
  • Read state/STRATEGY_PLAN.json and confirm that the current round allows scientific_debates_generation.
  • If the round is parented, read the selected parent hypothesis and its latest review summary before opening debate. The debate should target unresolved weaknesses rather than restart from zero.

Execution Prompt Contract:

  • System Intent:
    • You are running a short structured debate whose output is exactly one canonical hypothesis candidate.
  • Required Reasoning Focus:
    • If this is an initial debate, start with 2-3 candidate directions, then converge quickly.
    • Every critique must identify a weakness and a constructive improvement.
    • After two or more substantial turns, prefer convergence over endless divergence.
    • The final candidate must have:
      • a specific mechanism
      • a falsifiable statement
      • a concrete experiment path
  • Do Not Do:
    • Do not let the debate expand into an open-ended brainstorming transcript.
    • Do not keep multiple finalists.
    • Do not end the round without a single canonical extracted hypothesis.
  • Output Shape:
    • Preserve the debate transcript in the trace.
    • Extract exactly one final candidate into the exact HypothesisContract from packages/agent_contracts/hypothesis.py.
    • origin.content.statement: 2-3 sentences maximum.
    • origin.content.mechanism: 2-3 sentences maximum.
    • origin.content.experimental_design: one concise multiline string with 3-6 numbered steps.
    • origin.content.experimental_design must remain one string field containing embedded line breaks; do not emit it as a list, array, or nested object.
    • origin.content.summary: one sentence.
    • origin.content.category: 1-5 words.

Execution Steps:

  1. Open skills/shared-references/schema-index.md, then read packages/agent_contracts/hypothesis.py and confirm the exact HypothesisContract shape before writing hypotheses/<id>/HYPOTHESIS.json.
  2. Read the required artifacts.
  3. Confirm that this round is allowed to use debate-based generation.
  4. Run a short structured debate for the active goal, keeping a traceable transcript.
  5. Converge to exactly one final candidate.
  6. Extract the final candidate into the canonical HypothesisContract.
  7. Write hypotheses/<id>/HYPOTHESIS.json, hypotheses/<id>/HYPOTHESIS.md, and hypotheses/<id>/ORIGIN.json.
  8. Validate the emitted artifacts before declaring success.

Artifact Rules:

  • The debate transcript belongs in the trace, not in place of the canonical hypothesis artifact.
  • ORIGIN.json may describe debate provenance and evidence, but must not replace HYPOTHESIS.json.
  • The final artifact must be consumable by downstream skills without reading the raw transcript.

Completion Rule:

  • This skill is complete only when exactly one valid canonical hypothesis artifact has been extracted from the debate and persisted for downstream use.
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 10d ago First seen · 80 lines · 18 tokens per session scan A 80ec1ba4fa39

Subscribe to this mod's changes

hypothesis-generate-debate is a skill published in the GitHub repository panjose/Co-Scientist (5 stars, last pushed 3mo ago), licensed Apache-2.0. It adds 18 tokens to every session and 807 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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