What is coograph-doctor?

A read-only diagnostic for a Coograph installation, checking its graph, code-graph server, MCP settings, files, hooks, and sync state. It can offer fixes after you approve them.

Use it to check a Coograph install, identify the first problem, and apply approved repairs one at a time.

It finds configuration and installation problems without changing anything first, making it easier to see why Coograph is not working.

How paullukic/coograph configures Claude Code and Codex

Reuse

Borrowing it

Nothing to install: this file belongs to paullukic/coograph. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file

curl -O https://raw.githubusercontent.com/paullukic/coograph/main/.agents/skills/coograph-doctor/SKILL.md

Clone the repo

git clone --depth 1 https://github.com/paullukic/coograph

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/skills/paullukic/coograph/coograph-doctor/github.svg)](https://agentmods.dev/skills/paullukic/coograph/coograph-doctor)

Your own site

<a href="https://agentmods.dev/skills/paullukic/coograph/coograph-doctor"><img src="https://agentmods.dev/badge/skills/paullukic/coograph/coograph-doctor/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

Your own site · 80×15

<a href="https://agentmods.dev/skills/paullukic/coograph/coograph-doctor"><img src="https://agentmods.dev/badge/skills/paullukic/coograph/coograph-doctor.svg" alt="Reviewed on agentmods" width="80" height="20"></a>

Per session 79 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.

When invoked 214 The whole file, excluding the scripts and references it only reads on demand.

Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.

Origin original No closer match found in the catalogue.

Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

Model	Per session	Once invoked
Fable 5.1	$0.00079	$0.00214
Opus 5.5	$0.00032	$0.00086
Sonnet 5.5	$0.00016	$0.00043
Haiku 4.5	$0.00008	$0.00021

Measured 11d ago against content hash 2fc83dd06826, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

coograph-doctor scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.agents/skills/coograph-doctor/SKILL.md · 19 lines

What it actually says

/coograph-doctor (Codex CLI)

Coograph install check. Follow .github/skills/coograph-doctor/SKILL.md exactly. That file is the single source of truth for the procedure across every supported tool.

Substitutions for Codex CLI:

SKILL.md tool	Codex CLI equivalent
`vscode_askQuestions`	Ask the user directly in the conversation
`read_file`	Use `view`
`run_in_terminal`	Use the shell

The script is read-only. Apply a fix only after the user says yes to it.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

11d ago First seen · 19 lines · 0 tokens per session scan A 2fc83dd06826

Subscribe to this mod's changes

coograph-doctor is a skill published in the GitHub repository paullukic/coograph (17 stars, last pushed 12d ago), licensed MIT. It adds 79 tokens to every session and 214 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-10-26.

Debugging ai-agents ai-coding ai-optimization ai-tools code-graph token-ai-optimizator

coograph-doctor next to 6 skills from other repositories
Mod	Type	Stars	Last push	Licence	Scan	Tokens	Works with
coograph-doctorpaullukic/coograph	Skill	17	12d ago	MIT	A	79	Claude Code, Codex
roamCranot/roam-code	Skill	515	6d ago	Apache-2.0	A	86	Claude Code
monitoring-observabilitytravisjneuman/.claude	Skill	107	yesterday	MIT	A	48	Claude Code, Codex
debug-systematictravisjneuman/.claude	Skill	107	yesterday	MIT	A	33	Claude Code
agent-refactoring-specialisttravisjneuman/.claude	Skill	107	yesterday	MIT	A	12	Claude Code
agent-debugging-specialisttravisjneuman/.claude	Skill	107	yesterday	MIT	A	12	Claude Code
diagnose-windows-sandbox-aclsingula-ai/alego	Skill	110	16d ago	MIT	A	67	Claude Code, Codex

coograph: Skill for Claude Code