find-annotations

find-annotations is a skill for Claude Code from Rezenders/scientific_writing_agent. It costs 35 tokens per session (497 once invoked), scanned A, original, Apache-2.0.

A manuscript-scanning skill for finding open inline notes in LaTeX files. LaTeX is a text-based system commonly used to write technical papers.

In plain words
What is it for?
Use it to search `.tex` files for commands such as `\todo`, `\revise`, and `\red`, then report each note with its file, line number, type, and content.
Why use it?
It gives writers one inventory of unfinished tasks, revision notes, warnings, and author comments before editing or submitting a paper.

Skill for Claude Code

Written for Claude Code: installed under .claude/.

Good fit Use it to search .tex files for commands such as \todo, \revise, and \red, then report each note with its file, line number, type, and content.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/rezenders/scientific_writing_agent/find-annotations
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add Rezenders/scientific_writing_agent --skill find-annotations
Clone the repo
git clone --depth 1 https://github.com/Rezenders/scientific_writing_agent

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for find-annotations

README.md
[![agentmods](https://agentmods.dev/badge/skills/rezenders/scientific_writing_agent/find-annotations.svg)](https://agentmods.dev/skills/rezenders/scientific_writing_agent/find-annotations)
Your own site
<a href="https://agentmods.dev/skills/rezenders/scientific_writing_agent/find-annotations"><img src="https://agentmods.dev/badge/skills/rezenders/scientific_writing_agent/find-annotations.svg" alt="Measured on agentmods" height="20"></a>
Per session 35 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 497 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00035 $0.00497
Opus 5 $0.00017 $0.00249
Sonnet 5 $0.00007 $0.00099
Haiku 4.5 $0.00003 $0.00050

Measured 7d ago against content hash f86622639e8f, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

find-annotations scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 7d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude/skills/find-annotations/SKILL.md · 69 lines

What it actually says

Find Annotations

Scans all .tex files for inline annotation commands and reports them grouped by type, with file and line number.

Standard Annotation Commands

Command Meaning
\todo{...} Open task / reminder
\revise{...} Content needing revision
\red{...} Highlighted warning

Workflow

Run the following search across all .tex files in the repository root:

grep -rn --include="*.tex" \
  -e '\\todo{' \
  -e '\\revise{' \
  -e '\\red{' \
  . | sort
# ADD YOUR AUTHORS: append -e '\\authorname{' for each author command

Then present results grouped by annotation type, showing:

  • File name and line number
  • Full annotation content (extract the {...} argument)

Output Format

### \todo  (N open)
- introduction.tex:42  — "add citation for claim about X"
- approach.tex:118     — "clarify the role of the resolution model here"

### \revise  (N open)
- evaluation.tex:73    — "this paragraph is too vague"

### \red  (N open)
- approach.tex:55  — "CHECK: is this still accurate after last refactor?"

### Author comments  (N open)
- [author-command].tex:204  — "..."

---
Total: N annotations across M files.

If no annotations are found, report: No open annotations — manuscript is clean.

Notes

  • Archive / scratch files that are not \input'd in the main document should be flagged separately.
  • Staging files for temporarily removed content should be included in the scan, as they may return to the main flow.
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 7d ago First seen · 69 lines · 35 tokens per session scan A f86622639e8f

Subscribe to this mod's changes

find-annotations is a skill published in the GitHub repository Rezenders/scientific_writing_agent (11 stars, last pushed 5mo ago), licensed Apache-2.0. It adds 35 tokens to every session and 497 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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