systematic-debugging

A four-phase method for finding the root cause of a software bug: observe, form hypotheses, verify them, and fix the cause.

In plain words
What is it for?
Use it to reproduce an issue, isolate the failing code, test up to three possible causes, and stop after two unsuccessful fixes.
Why use it?
It prevents repeated trial-and-error changes that can create new bugs or hide the original problem.

Skill for Claude CodeCodex

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add skills/sethgammon/citadel/systematic-debugging
Any agent
npx skills add SethGammon/Citadel --skill systematic-debugging
Clone the repo
git clone --depth 1 https://github.com/SethGammon/Citadel

Made for: Claude Code, Codex.

Per session 45 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,276 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5 $0.00045 $0.01276
Opus 5 $0.00023 $0.00638
Sonnet 5 $0.00009 $0.00255
Haiku 4.5 $0.00005 $0.00128

Measured 2d ago against content hash f673e7bf5f8e, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

systematic-debugging scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/systematic-debugging/SKILL.md · 144 lines

How it starts

The opening of the file, as written. The whole thing — 144 lines — stays where its author put it; the contents beside it link to each section on GitHub.

/systematic-debugging — Root Cause Before Fix

Orientation

Use when: root cause is unknown and premature fixes keep failing -- enforces observe -> hypothesize -> verify before touching code. Don't use when: root cause is already known (use /marshal to implement the fix); the bug is shallow and the stack trace is enough (use /do).

Protocol

Phase 1: OBSERVATION & REPRODUCTION

  1. Read the error message, stack trace, or bug description
  2. Reproduce the issue:
    • If it's a type error: run typecheck and read the full error
    • If it's a runtime error: identify the triggering conditions
    • If it's a behavioral bug: document expected vs actual behavior
  3. Isolate the failing component/function:
    • What file? What function? What line?
    • What are the inputs when it fails?
    • Does it fail consistently or intermittently?

Output: A clear problem statement: "{Component} does {X} when it should do {Y}, triggered by {condition}"

Phase 2: HYPOTHESIS & VERIFICATION

  1. Formulate up to 3 hypotheses for WHY the bug exists:

    • H1: {most likely cause} — because {evidence}
    • H2: {second candidate} — because {evidence}
    • H3: {third candidate} — because {evidence}
  2. For each hypothesis, define a verification step:

    • Add a console.log / diagnostic read / breakpoint
    • Check a specific value at a specific point
    • DO NOT change any logic yet — only observe
  3. Run the verification:

    • Which hypothesis was confirmed?
    • Which were eliminated?
    • If none confirmed: formulate new hypotheses with the new information

CRITICAL: Do not skip this phase. Do not "just try" a fix. Verify first.

Phase 3: ROOT CAUSE ANALYSIS

Once a hypothesis is confirmed:

  1. Explain WHY the bug happens, not just WHERE:
    • Trace the data flow backward from the symptom to the source
    • Identify the specific incorrect assumption or logic error
    • Document the causal chain: "A calls B with X, B assumes X > 0, but A passes -1 when {condition}"

Read the full file on GitHub · 144 lines

Files

What ships with it

2 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 2d ago First seen · 144 lines · 45 tokens per session scan A f673e7bf5f8e

Subscribe to this mod's changes

systematic-debugging is a skill published in the GitHub repository SethGammon/Citadel (914 stars, last pushed 5d ago), licensed MIT. It adds 45 tokens to every session and 1,276 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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