python-project-setup

A setup guide for Python projects using a project configuration file, code checks, type checks, automated tests, and pre-commit checks.

In plain words
What is it for?
Starting Python libraries, web apps, command-line tools, or data pipelines with files such as pyproject.toml, pytest tests, Ruff checks, and CI configuration.
Why use it?
It gives a new Python project a consistent structure and catches style, type, and test problems before changes are shared.

Skill for Claude CodeCodex

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add skills/timwukp/agent-skills-best-practice/python-project-setup
Any agent
npx skills add timwukp/agent-skills-best-practice --skill python-project-setup
Clone the repo
git clone --depth 1 https://github.com/timwukp/agent-skills-best-practice

Made for: Claude Code, Codex.

Per session 70 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,579 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5 $0.00070 $0.01579
Opus 5 $0.00035 $0.00790
Sonnet 5 $0.00014 $0.00316
Haiku 4.5 $0.00007 $0.00158

Measured 2d ago against content hash 6c2485fd8348, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

python-project-setup scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/skills/python-project-setup/SKILL.md · 274 lines

How it starts

The opening of the file, as written. The whole thing — 274 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Python Project Setup

Instructions

Step 1: Gather Requirements

Ask:

  1. What type of project? (library/package, web app, CLI tool, data pipeline)
  2. Minimum Python version? (default: 3.11+)
  3. Package manager preference? (pip, uv, poetry, pdm)
  4. Layout preference? (src-layout or flat-layout)
  5. What frameworks? (FastAPI, Django, Flask, Click, Typer)
  6. CI platform? (GitHub Actions, GitLab CI)

Step 2: Project Structure

src-layout (recommended for libraries):

my-project/
  src/
    my_package/
      __init__.py
      main.py
      models.py
  tests/
    __init__.py
    conftest.py
    test_main.py
  pyproject.toml
  README.md
  .pre-commit-config.yaml
  .github/
    workflows/
      ci.yml

flat-layout (simpler, for apps):

my-project/
  my_package/
    __init__.py
    main.py
  tests/
    conftest.py
    test_main.py
  pyproject.toml
  README.md

Use src-layout by default. It prevents accidental imports of the source during testing.

Step 3: Generate pyproject.toml

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[project]
name = "my-package"
version = "0.1.0"
description = "A brief description of the project"
readme = "README.md"
license = "MIT"
requires-python = ">=3.11"
authors = [
    { name = "Your Name", email = "[email protected]" },
]
dependencies = []

[project.optional-dependencies]
dev = [
    "pytest>=8.0",
    "pytest-cov>=5.0",
    "ruff>=0.4",
    "mypy>=1.10",
    "pre-commit>=3.7",
]

[project.scripts]
my-cli = "my_package.main:cli"

[tool.pytest.ini_options]
testpaths = ["tests"]
addopts = [
    "--strict-markers",
    "--strict-config",
    "-ra",
]

[tool.ruff]
target-version = "py311"
line-length = 88

[tool.ruff.lint]
select = [
    "E",    # pycodestyle errors
    "W",    # pycodestyle warnings
    "F",    # pyflakes
    "I",    # isort
    "B",    # flake8-bugbear
    "C4",   # flake8-comprehensions
    "UP",   # pyupgrade
    "SIM",  # flake8-simplify
]

[tool.ruff.lint.isort]
known-first-party = ["my_package"]

[tool.mypy]
python_version = "3.11"
strict = true
warn_return_any = true
warn_unused_configs = true

[tool.coverage.run]
source = ["src/my_package"]
branch = true

[tool.coverage.report]
fail_under = 80
show_missing = true
exclude_lines = [
    "pragma: no cover",
    "if TYPE_CHECKING:",
]

Read the full file on GitHub · 274 lines

Files

What ships with it

2 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 2d ago First seen · 274 lines · 70 tokens per session scan A 6c2485fd8348

Subscribe to this mod's changes

python-project-setup is a skill published in the GitHub repository timwukp/agent-skills-best-practice (9 stars, last pushed 18d ago), licensed MIT. It adds 70 tokens to every session and 1,579 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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