llm-wiki-builder

llm-wiki-builder is a skill for Claude Code, Codex from u9401066/rootcause-mcp. It costs 34 tokens per session (350 once invoked), scanned A, a copy of llm-wiki-builder, Apache-2.0.

A workflow skill for building Foam-compatible literature wikis from sources such as Zotero, PubMed, documents, and Markdown notes. Foam is a Markdown-based knowledge system for linked notes.

In plain words
What is it for?
Use it to create, refresh, repair, or extend research wikis, including notes based on saved papers, PubMed results, PDFs, and local documents.
Why use it?
It organizes research notes and preserves links and source identifiers, reducing scattered or poorly traceable literature information.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to create, refresh, repair, or extend research wikis, including notes based on saved papers, PubMed results, PDFs, and local documents.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/u9401066/rootcause-mcp/llm-wiki-builder
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add u9401066/rootcause-mcp --skill llm-wiki-builder
Clone the repo
git clone --depth 1 https://github.com/u9401066/rootcause-mcp

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for llm-wiki-builder

README.md
[![agentmods](https://agentmods.dev/badge/skills/u9401066/rootcause-mcp/llm-wiki-builder/github.svg)](https://agentmods.dev/skills/u9401066/rootcause-mcp/llm-wiki-builder)
Your own site
<a href="https://agentmods.dev/skills/u9401066/rootcause-mcp/llm-wiki-builder"><img src="https://agentmods.dev/badge/skills/u9401066/rootcause-mcp/llm-wiki-builder/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for llm-wiki-builder

Your own site · 80×15
<a href="https://agentmods.dev/skills/u9401066/rootcause-mcp/llm-wiki-builder"><img src="https://agentmods.dev/badge/skills/u9401066/rootcause-mcp/llm-wiki-builder.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 34 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 350 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin 92% copy Near-identical to another mod in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00034 $0.00350
Opus 5 $0.00017 $0.00175
Sonnet 5 $0.00007 $0.00070
Haiku 4.5 $0.00003 $0.00035

Measured 8d ago against content hash 726a5c27dd51, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

llm-wiki-builder scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

This is a copy

92% identical to llm-wiki-builder — 3 lines differ, which has more behind it and is treated as the original. This page carries a canonical link to it rather than competing with it.

.cline/skills/llm-wiki-builder/SKILL.md · 39 lines

What it actually says

LLM Wiki Builder

Use this skill when the user asks to create, refresh, repair, or extend a Foam wiki or LLM-readable literature wiki.

Read First

  • .clinerules/35-foam-llm-wiki.md
  • .clinerules/workflows/llm-wiki-build.md
  • .github/zotero-research-workflow.md when Zotero or PubMed evidence is involved

Multi-Tool Choreography

  1. Inspect the filesystem for the wiki root, Foam markers, existing note style, and link conventions.
  2. Use Zotero tools to inspect saved library items, collections, and duplicate state before importing or refetching.
  3. Use PubMed Search MCP tools for discovery, article details, related/citing articles, references, exports, persistent Research Chronicle, and full-text follow-up.
  4. Use asset-aware or document tools when PDFs, DOCX, DFM, tables, figures, or span-level citations are part of the request.
  5. Write or update Markdown notes with Foam-compatible wikilinks and preserved source identifiers.
  6. Validate generated links and report unresolved wiki TODOs separately from completed notes.

Output Contract

  • Keep the note graph readable in Foam and useful for LLM retrieval.
  • Preserve source provenance close to claims.
  • Ask before bulk rewrites, destructive cleanup, or Zotero imports.
  • Do not leave broken wikilinks hidden in generated files.
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 8d ago First seen · 39 lines · 34 tokens per session scan A 726a5c27dd51

Subscribe to this mod's changes

llm-wiki-builder is a skill published in the GitHub repository u9401066/rootcause-mcp (0 stars, last pushed 6d ago), licensed Apache-2.0. It adds 34 tokens to every session and 350 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. It is 92% identical to llm-wiki-builder, differing in 3 lines, and is treated as a copy.

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