Skill Claude CodeCodex
Process, convert, OCR, extract, redact, sign, and fill documents using the Nutrient DWS API. Works with PDFs, DOCX, XLSX, PPTX, HTML, and images.
not rated 60 5mo ago A 47 tokens
copy · 95% MIT
60Stars on the repository
200Mods indexed here, across every type
5mo agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown
Skill Claude CodeCodex
Optional integration with K-Dense Web for end-to-end multi-agent research workflows. Use when the user asks about K-Dense or needs complex research orchestration beyond single-agent capability.
not rated 60 5mo ago A 42 tokens
original MIT
Skill Claude CodeCodex
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.
not rated 60 5mo ago A 39 tokens
copy · 88% MIT
Skill Claude CodeCodex
Search Open Targets drug-disease associations with natural language queries. Target validation powered by Valyu semantic search.
not rated 60 5mo ago B 26 tokens
copy · 100% MIT
Skill Claude CodeCodex
Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly…
not rated 60 5mo ago A 76 tokens
copy · 86% MIT
Skill Claude CodeCodex
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for therapeutic target identification.
not rated 60 5mo ago A 40 tokens
copy · 89% MIT
Skill Claude CodeCodex
Official Opentrons Protocol API for OT-2 and Flex robots. Use when writing protocols specifically for Opentrons hardware with full access to Protocol API v2 features. Best for production Opentrons protocols, official API compatibility. For multi-vendor automation or broader equipment control use pylabrobot.
not rated 60 5mo ago A 66 tokens
copy · 88% MIT
paper-2-web
128Skill Claude Code needs its repo
This skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference posters (Paper2Poster). Use this skill for tasks involving paper dissemination, conference preparation, creating explorable…
not rated 60 5mo ago A 78 tokens
copy · 86% MIT
patent-drafting
129Skill Claude CodeCodex
Draft patent applications for scientific inventions, covering claims, specification, and prior art analysis.
not rated 60 5mo ago A 0 tokens
copy · 89% MIT
patents-search
130Skill Claude CodeCodex
Search global patents with natural language queries. Prior art, patent landscapes, and innovation tracking via Valyu.
not rated 60 5mo ago B 25 tokens
copy · 100% MIT
pathml
131Skill Claude CodeCodex
Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For simple tile extraction from H&E slides, histolab may be…
not rated 60 5mo ago A 69 tokens
copy · 88% MIT
pdb-database
132Skill Claude CodeCodex
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
not rated 60 5mo ago A 49 tokens
copy · 95% MIT
peer-review
133Skill Claude Code needs its repo
Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating…
not rated 60 5mo ago A 71 tokens
copy · 94% MIT
pennylane
134Skill Claude CodeCodex
Hardware-agnostic quantum ML framework with automatic differentiation. Use when training quantum circuits via gradients, building hybrid quantum-classical models, or needing device portability across IBM/Google/Rigetti/IonQ. Best for variational algorithms (VQE, QAOA), quantum neural networks, and integration with…
not rated 60 5mo ago A 100 tokens
copy · 86% MIT
Skill Claude CodeCodex needs its repo
Perform AI-powered web searches with real-time information using Perplexity models via LiteLLM and OpenRouter. This skill should be used when conducting web searches for current information, finding recent scientific literature, getting grounded answers with source citations, or accessing information beyond the model…
not rated 60 5mo ago A 98 tokens
copy · 91% MIT
plotly
136Skill Claude CodeCodex
Interactive visualization library. Use when you need hover info, zoom, pan, or web-embeddable charts. Best for dashboards, exploratory analysis, and presentations. For static publication figures use matplotlib or scientific-visualization.
not rated 60 5mo ago A 48 tokens
copy · 83% MIT
polars
137Skill Claude CodeCodex
Fast in-memory DataFrame library for datasets that fit in RAM. Use when pandas is too slow but data still fits in memory. Lazy evaluation, parallel execution, Apache Arrow backend. Best for 1-100GB datasets, ETL pipelines, faster pandas replacement. For larger-than-RAM data use dask or vaex.
not rated 60 5mo ago A 69 tokens
copy · 77% MIT
pptx-generation
138Skill Claude CodeCodex
A tool for creating academic PowerPoint presentations, such as conference talks, thesis defenses, group-meeting updates, and project introductions.
not rated 60 5mo ago A 70 tokens
original MIT
pptx-posters
139Skill Claude Code needs its repo
Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster format. For standard research posters, use latex-posters instead. This skill provides modern web-based poster design with responsive layouts and easy visual…
not rated 60 5mo ago A 66 tokens
copy · 86% MIT
data-analysis
140Skill Claude CodeCodex
Load, analyze, and visualize datasets using pandas with AG Grid display.
not rated 60 5mo ago A 16 tokens
original MIT
jupyter
141Skill Claude CodeCodex
Create and execute Jupyter notebooks for interactive data analysis using jupyterexecute and jupyternotebook tools.
not rated 60 5mo ago A 23 tokens
original MIT
latex-writing
142Skill Claude CodeCodex
Create, edit, and compile LaTeX documents for academic papers using latexcompile, updatelatex, and senduidirective tools.
not rated 60 5mo ago A 30 tokens
original MIT
ml-experiment
143Skill Claude CodeCodex
Design and run machine learning experiments with proper evaluation using jupyterexecute, including training, benchmarking, and ablation studies.
not rated 60 5mo ago A 27 tokens
original MIT
paper-search
144Skill Claude CodeCodex
Search and discover academic papers from arXiv and web sources using arxivtoprompt and web search.
not rated 60 5mo ago A 23 tokens
original MIT
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