Skill Claude CodeCodex
Prepare regulatory submissions for drugs, biologics, devices, and diagnostics.
not rated 60 5mo ago A 0 tokens
original MIT
60Stars on the repository
200Mods indexed here, across every type
5mo agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown
Skill Claude CodeCodex
Ensure research is reproducible, transparent, and meets open science standards.
not rated 60 5mo ago A 0 tokens
original MIT
research-alerts
171Skill Claude CodeCodex
A monitoring setup that checks PubMed and bioRxiv, a public server for research papers shared before formal peer review, for new papers on chosen topics.
not rated 60 5mo ago A 71 tokens
original MIT
research-grants
172Skill Claude Code
Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader impacts, significance statements, innovation narratives, and compliance with submission requirements.
not rated 60 5mo ago A 48 tokens
original MIT
research-lookup
173Skill Claude Code needs its repo
Look up current research information using Perplexity Sonar Pro Search or Sonar Reasoning Pro models through OpenRouter. Automatically selects the best model based on query complexity. Search academic papers, recent studies, technical documentation, and general research information with citations.
not rated 60 5mo ago A 55 tokens
copy · 91% MIT
research-recipes
174Skill Claude CodeCodex
Pre-built research workflow templates that execute complete multi-step analyses from a single user prompt. Triggers on gene analysis, target validation, literature review, differential expression, clinical queries, researcher profiling, drug repurposing, or molecular dynamics simulation. Use when the user's query…
not rated 60 5mo ago A 67 tokens
original MIT
review-writing
175Skill Claude CodeCodex
A guided process for writing literature reviews and review articles from an outline. It organizes the work section by section, from finding and grouping sources to writing, citing, and saving the result.
not rated 60 5mo ago A 0 tokens
original MIT
rowan
176Skill Claude CodeCodex
Cloud-based quantum chemistry platform with Python API. Preferred for computational chemistry workflows including pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2). Use when tasks involve…
not rated 60 5mo ago A 115 tokens
copy · 100% MIT
scanpy
177Skill Claude CodeCodex needs its repo
Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory scRNA-seq analysis with established workflows. For deep learning models use scvi-tools; for data format questions use…
not rated 60 5mo ago A 68 tokens
original MIT
Skill Claude CodeCodex needs its repo
Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and actionable feedback.
not rated 60 5mo ago A 40 tokens
copy · 88% MIT
Skill Claude CodeCodex
Translate complex scientific findings into engaging content for non-specialist audiences.
not rated 60 5mo ago A 0 tokens
original MIT
Skill Claude CodeCodex
Rachel's aesthetic reference for all visualization work. Use this skill when generating any scientific figure.
not rated 60 5mo ago A 0 tokens
original MIT
Skill Claude CodeCodex
Joey's reference for all presentation work. Use this skill when creating academic presentations.
not rated 60 5mo ago A 0 tokens
original MIT
Skill Claude CodeCodex
Creative research ideation and exploration. Use for open-ended brainstorming sessions, exploring interdisciplinary connections, challenging assumptions, or identifying research gaps. Best for early-stage research planning when you do not have specific observations yet. For formulating testable hypotheses from data use…
not rated 60 5mo ago A 60 tokens
copy · 89% MIT
Skill Claude Code needs its repo
Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases and confounders, applying evidence grading frameworks (GRADE, Cochrane Risk of Bias), or teaching critical analysis. Best for understanding evidence quality, identifying flaws. For formal peer review…
not rated 60 5mo ago A 63 tokens
copy · 83% MIT
Skill Claude CodeCodex
AI-powered scientific illustration generation using Gemini Image models. Creates publication-quality mechanism diagrams, pathway illustrations, and scientific figures.
not rated 60 5mo ago A 0 tokens
original MIT
Skill Claude Code needs its repo
Create publication-quality scientific diagrams using Nano Banana Pro AI with smart iterative refinement. Uses Gemini 3 Pro for quality review. Only regenerates if quality is below threshold for your document type. Specialized in neural network architectures, system diagrams, flowcharts, biological pathways, and…
not rated 60 5mo ago A 64 tokens
copy · 89% MIT
Skill Claude Code needs its repo
Slide design principles for scientific presentations — structure, pacing, visual hierarchy. For actual PPTX file generation, use the pptx-generation skill instead.
not rated 60 5mo ago A 34 tokens
original MIT
Skill Claude CodeCodex
Meta-skill for publication-ready figures. Use when creating journal submission figures requiring multi-panel layouts, significance annotations, error bars, colorblind-safe palettes, and specific journal formatting (Nature, Science, Cell). Orchestrates matplotlib/seaborn/plotly with publication styles. For quick…
not rated 60 5mo ago A 72 tokens
copy · 91% MIT
Skill Claude Code
Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing prose. IMRAD structure, citations (APA/AMA/Vancouver), figures/tables, reporting…
not rated 60 5mo ago A 87 tokens
original MIT
scikit-bio
189Skill Claude CodeCodex
Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.
not rated 60 5mo ago A 54 tokens
copy · 88% MIT
scikit-learn
190Skill Claude CodeCodex needs its repo
Machine learning in Python with scikit-learn. Use when working with supervised learning (classification, regression), unsupervised learning (clustering, dimensionality reduction), model evaluation, hyperparameter tuning, preprocessing, or building ML pipelines. Provides comprehensive reference documentation for…
not rated 60 5mo ago A 68 tokens
copy · 86% MIT
scikit-survival
191Skill Claude CodeCodex
Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored survival data, performing time-to-event analysis, fitting Cox models, Random Survival Forests, Gradient Boosting models, or Survival SVMs, evaluating survival predictions…
not rated 60 5mo ago A 91 tokens
copy · 91% MIT
scvi-tools
192Skill Claude CodeCodex
Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch effects, multimodal data. For standard analysis pipelines use scanpy.
not rated 60 5mo ago A 65 tokens
copy · 75% MIT
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: