Skill Claude CodeCodex
Protocol for creating dated changelog files after significant agent sessions. Use when completing vault operations, discovery sessions, insight extraction, or any work requiring documentation.
Skill Claude CodeCodex
Run a full coherence sweep across the Brain Dependency Graph - computes staleness, lifecycle transitions, structural health, and generates a report.
Skill Claude CodeCodex
Compute lifecycle scores for all insight and framework notes - detect which notes are crystallizing or becoming generative.
Skill Claude CodeCodex
Create long-form articles from knowledge base insights. Use when writing articles, blog posts, Substack content, or synthesizing knowledge into publishable content. Includes tone of voice, structure templates, and knowledge base integration.
Skill Claude CodeCodex
Generate explanatory diagrams and infographics that visually communicate concepts. Iterates autonomously until images are logically correct, text is clean, and the concept explanation is clear. Uses Nano Banana (Gemini 2.5 Flash Image).
Skill Claude CodeCodex
Autonomous research pipeline - discover, extract, and integrate cutting-edge insights into knowledge base.
Skill Claude CodeCodex
Detect productive contradictions between notes - high semantic similarity with opposing conclusions that represent synthesis opportunities.
Skill Claude CodeCodex
An Electric Monk engine — two subagents believe fully committed positions on the user's behalf while the orchestrator performs structural contradiction analysis and synthesis. By outsourcing belief work to agents, the user operates from a belief-free position where they can analyze the structure of the contradiction…
Skill Claude CodeCodex
Autonomous perception layer - scans KB for new notes matching domain watch configs, checks gap resonance with the Thinking Registry, probes external signals via web search, and auto-activates HIGH/MEDIUM signals into the Thinking Registry for the incubation loop.
Skill Claude CodeCodex
Advanced techniques for extracting insights, probing user thinking, and conducting cognitive interviews. Use when harvesting insights, exploring beliefs, clarifying concepts, or helping users articulate their unique perspectives.
Skill Claude CodeCodex
Framework for distinguishing research findings from hypotheses and speculative synthesis. Use when extracting insights from research, creating notes from external sources, or classifying the epistemic status of claims.
Skill Claude CodeCodex
Extract all chapters from an EPUB file into separate markdown files. Use when the user wants to split an EPUB into individual chapter files, extract EPUB chapters, or convert an ebook to separate markdown documents.
Skill Claude CodeCodex
Extract insights from external documents (research papers, books, articles). Spawns document-insight-extractor subagent. Requires session name.
Skill Claude CodeCodex
Extract unique insights and perspectives from personal content (conversations, transcripts, notes). Spawns insight-extractor subagent.
Skill Claude CodeCodex
Discover hidden connections and relationships between notes in the knowledge base.
Skill Claude CodeCodex
Extract the user's perspective on a topic (called by a content agent or user).
Skill Claude CodeCodex
Extract the transcript from a YouTube video by URL or video ID. Use when the user shares a YouTube link and wants the transcript, captions, or text content of the video. Falls back automatically if the requested language isn't available.
Skill Claude CodeCodex
Stage, commit, and push changes to remote repository with approval gate.
Skill Claude CodeCodex
Review and graduate notes to permanent status using Zettelkasten principles. Consolidates AI extractions and document insights into curated permanent notes.
Skill Claude CodeCodex
Autonomous iterative thinking loop - processes active topics using rotating analytical moves (ACH, Bayesian updating, steelmanning, cross-domain bridging, implication checks) and persists reasoning state across scheduled runs.
Skill Claude CodeCodex
Fully autonomous end-to-end ingestion of a SINGLE source (book, paper, article, transcript) into the knowledge base - prepare to markdown, extract insights against the live index, refresh the index, auto-link to existing knowledge, and changelog. One source per invocation.
Skill Claude CodeCodex
Standard format for capturing and documenting insights in the knowledge base. Use when harvesting insights, creating permanent notes from user perspectives, or documenting unique thinking patterns.
Skill Claude CodeCodex
KB-grounded Socratic interview. Searches existing notes on a topic, then runs a one-question-at-a-time dialogue to surface, sharpen, and extract your own thinking. Ends by running extract-insights on the full conversation transcript.
Skill Claude CodeCodex
Find notes created in the last 14 days and discover their connections to the knowledge base.