Agent
After a valid blind comparison, unblind the result and explain why the winner performed better. Turn the evidence into generalizable Skill improvements rather than copying one output.
Agent
Compare output A and output B without knowing which Skill configuration produced either one. Judge task completion and output quality, not presumed implementation quality.
Agent
Evaluate expectations against an execution transcript and output files. Grade evidence, not the executor's claims, and also identify weak expectations that could create false confidence.
Skill Claude CodeCodex
Inverse-fold a backbone with SolubleMPNN — ProteinMPNN retrained on a soluble-PDB subset (Dauparas et al. 2022) — for sequences biased toward cytosolic expression and reduced aggregation. Reach for this skill when designs from vanilla ProteinMPNN are aggregating or going to inclusion bodies, when redesigning a…
aipoch/medical-research-skills
Skill Claude CodeCodex
Run a submission-readiness preflight on a manuscript before arXiv upload. Use when the user is preparing an arXiv submission, asks to check a paper before uploading, mentions hallucinated or fake references, leftover LLM meta-comments / prompts in text, placeholder data (TODO, TBD, XX%), AI-use disclosure, scholarly…
aipoch/medical-research-skills
Skill Claude CodeCodex
Turns reviewer comments into structured, professional point-by-point responses linked to manuscript revisions, clarifications, rebuttals, and additional analyses.
aipoch/medical-research-skills
Skill Claude CodeCodex
Calibrates manuscript claim strength so wording matches the actual evidence level, study design, and validation status.
aipoch/medical-research-skills
Skill Claude CodeCodex
Condenses a full study into conference-submission abstract format. Use when adapting a manuscript abstract or study summary to meet a specific conference's word limit, structured format (Background/Methods/Results/Conclusion), character limits, or required section headings. Also triggers on "adapt my abstract for…
aipoch/medical-research-skills
Skill Claude CodeCodex
Checks consistency across title, abstract, methods, results, figures, tables, and supplements to identify internal contradictions and version drift in biomedical manuscripts.
aipoch/medical-research-skills
Skill Claude CodeCodex
Drafts journal-ready cover letters for manuscript submission. Use when preparing a submission package, communicating the manuscript's contributions and journal fit to editors, or tailoring the novelty framing for a specific journal's scope. Also triggers on "write a cover letter for my paper", "draft a submission…
aipoch/medical-research-skills
Skill Claude CodeCodex
Composes a Discussion around key findings, mechanisms, clinical relevance, and limitations. Use when writing or improving a Discussion section for any biomedical manuscript — including interpreting results, connecting to prior literature, addressing unexpected findings, framing limitations, and writing the conclusion.…
aipoch/medical-research-skills
Skill Claude CodeCodex
Writes complete, publication-grade figure legends that can stand on their own. Use when writing or revising figure legends for any scientific figure — bar charts, line graphs, scatter plots, box plots, heatmaps, survival curves, flow cytometry plots, western blots, microscopy images, or schematic diagrams. Also…
aipoch/medical-research-skills
Skill Claude CodeCodex
Writes Specific Aims pages for grant applications. Use when drafting or revising the Specific Aims page (NIH R01/R21/R03), NSF Project Summary, or equivalent for any major funding agency. Also triggers on "write my specific aims", "help me draft specific aims for NIH", "what should a specific aims page include", "NSF…
aipoch/medical-research-skills
Skill Claude CodeCodex
Converts a biomedical study storyline into a graphical abstract and, when direct image capability is available, generates the graphical abstract directly; otherwise it falls back to prompts, Mermaid flowcharts, or designer-facing briefs.
aipoch/medical-research-skills
Skill Claude CodeCodex
Builds background-gap-objective logic for biomedical manuscript introductions with clear study positioning and disciplined narrative structure.
aipoch/medical-research-skills
Skill Claude CodeCodex
Writes the full Introduction section of a biomedical manuscript based on an approved or sufficiently clear study logic, while preserving evidence boundaries and introduction discipline.
aipoch/medical-research-skills
Skill Claude CodeCodex
Converts existing manuscript content into LaTeX format aligned with a target journal, conference, or template while preserving manuscript meaning and structural integrity.
aipoch/medical-research-skills
Skill Claude CodeCodex
Rewrites technical research content into a structured lay summary that cross-disciplinary teams can quickly understand and act on. Use when the user wants to explain research to colleagues outside their specialty — clinicians, wet-lab scientists, bioinformaticians, product managers, or leadership. Trigger on: "lay…
aipoch/medical-research-skills
Skill Claude CodeCodex
Acknowledges limitations in sample, design, measurement, and validation in a professional way that improves credibility without undermining the whole paper. Use when writing the limitations paragraph of a Discussion section, preparing a grant risk assessment, responding to reviewers about study weaknesses, or framing…
aipoch/medical-research-skills
Skill Claude CodeCodex
Improves medical English precision without changing the underlying facts, evidence boundaries, or intended scientific meaning.
aipoch/medical-research-skills
Skill Claude CodeCodex
Turns your protocol and analysis workflow into publication-ready Methods text. Use when writing or revising the Methods section of a biomedical manuscript, ensuring it complies with reporting guidelines (CONSORT, STROBE, PRISMA, TRIPOD), matches what is in the Results section, and satisfies journal-specific word…
aipoch/medical-research-skills
Skill Claude CodeCodex
Scrum-inspired paper review, revision, and R&R workflow. Handles docx/tex/md/PDF in English or Chinese. Auto-detects manuscript stage, estimates sprint count, runs multi-lens review (Contribution/Rigor/Writing/Editor), generates prioritized revision backlog, exports MD/DOCX/PDF/HTML reports. Use when asked to review a…
aipoch/medical-research-skills
Skill Claude CodeCodex
Reorganizes a paper into a storyline suitable for scientific posters. Use when planning the section structure, title hierarchy, figure selection, and live-explanation flow for an academic conference poster. Also triggers on "help me design a poster layout", "what sections should my poster have", "how do I arrange my…
aipoch/medical-research-skills
Skill Claude CodeCodex
Checks whether manuscript references are accurately matched to claims, appropriately scoped, and not overextended, misquoted, or second-hand cited.