Instructions file CodexOpenCode
Instructions for ArcInstitute/SRAgent, covering repository guidelines, project structure & module organization, build, test, and development commands, coding style & naming conventions and testing guidelines.
Instructions file Gemini CLI
Instructions for ArcInstitute/SRAgent, a project described as: LLM agents for working with the SRA and associated bioinformatics databases.
Skill Claude CodeCodex
Query the Sequence Read Archive (SRA), retrieve scientific publications, and analyze genomics metadata using the SRAgent toolkit. Supports accession conversion (GSE→SRX→SRR), BigQuery metadata queries, manuscript downloads from multiple sources, and scRNA-seq technology identification. Use when working with SRA/GEO…