csml-rpi

csml-rpi/Foam-Agent

Instructions file CodexOpenCode

Instructions for csml-rpi/Foam-Agent, covering agents.md, what is foam-agent?, build and run, environment setup and run a simulation.

csml-rpi/AI-CFD-Scientist

Instructions file CodexOpenCode

AGENTS.md instructions for csml-rpi/AI-CFD-Scientist, covering cfd scientist — agents.md, orchestrator-agnostic pipeline, environment, stage 0 — route by topic intent (mandatory) and stage 1 — literature (s2 first).

csml-rpi/AI-CFD-Scientist

Instructions file

Claude Code instructions for csml-rpi/AI-CFD-Scientist, covering cfd scientist, environment — always activate first, routing, required orchestration behavior and two execution modes.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Per-case + cross-case TEXT/JSON analysis — collect all PROCEED-flagged cases, compute QoI tables, identify trends and correlations, produce analysis.json that downstream skills consume. Self-contained — embeds ResultsInterpreterAgent.systemprompt + userprompt verbatim. Scope boundary — this skill produces text +…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Implement a custom OpenFOAM model (viscosity / turbulence / source term / fvOption) inside a case-local customModels directory. Self-contained — embeds the full openfoamliteraturechangeagentpromptv2 protocol AND the compilefix prompts verbatim. Builds payload, generates C++, compiles with wmake, smoke-tests. NEVER…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Cross-experiment quantitative analysis. Author Python scripts (numpy + matplotlib + PyVista + pandas) that load every PROCEED case, compute aggregated metrics, and generate the comparison figures the paper needs (Cf overlays vs reference, RMSE bar charts, parametric trends, Δ-field contours). Then run a vision+text…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Run CFD cases. Two modes — sweep (ARIS-style, agent-driven, no FoamAgent handoff) for parameter variants on a known-good baseline; single-case (FoamAgent-driven via scripts/foamrun.py) for fresh case generation that needs RAG. Embeds RunValidityAgent prompts (Allrun preflight + runtime investigation) verbatim. Writes…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Generate one OpenFOAM case from a natural-language requirement using a markdown-driven FoamAgent loop. Self-contained — embeds parser/planner/writer/reviewer prompts verbatim from Foam-Agent/src/services/. The agent runtime drives the loop natively via Read/Write/Bash. FAISS RAG retrieval uses scripts/ragquery.py…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Convert literature + topic into a list of testable, FoamAgent-executable CFD hypotheses. Self-contained — embeds the HypothesisAgent system + user prompts verbatim from prompts/prompts.yaml. Outputs hypotheses.json. Use after cfd-literature in the general pipeline.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Per-case decision agent — PROCEED, REVISE, or RERUN. Reads runresult.json + diagnostic figures, judges physics plausibility through a vision-LLM pass, returns decision.json. Self-contained — embeds ResultsInterpreterAgent.interpretation and vision prompts verbatim.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Retrieve CFD literature for a topic via Semantic Scholar (with optional OpenAlex / arXiv / web supplements) and write a normalized lit.json. Use when the user wants a literature survey for a CFD study, or when cfd-pipeline / cfd-hypothesis / cfd-paper needs lit.json upstream. Self-contained — no Python helper…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Mandatory mesh-independence study before any experiments. Per physics group, run baseline + refined meshes (10% near-wall, 5% away-from-wall), compare QoIs against the 5% threshold, escalate to GCI if needed, lock the selected mesh. Self-contained protocol embedded in this file (merged from…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Open-ended discovery loop — propose novel CFD model modifications (e.g. SA / k-omega variants, viscosity laws), implement via cfd-code-modify, run via cfd-experiment, score against baseline + reference, repeat until budget. Self-contained — embeds MetricProposer, ComparatorAuthor (text + PyVista), ComparatorVerifier…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

General-purpose academic paper writer skill for CFD research, adapted from Master-cai/Research-Paper-Writing-Skills with CFD-domain overlays. Embeds section-by-section structural guidance (Abstract / Introduction / Related Work / Methods / Experiments / Discussion / Conclusion), Master-cai's reviewer rubric, and a…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Full paper writing in skill mode. ONE skill that walks the agent through a strict numbered protocol: Stage 0 experiment planner, then a planner-viz-writer-compile-reviewer-revise cycle that iterates until the reviewer returns pass=true or the cap is hit. Each phase is one concrete agent action with the LLM prompt…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Top-level CFD Scientist research pipeline. Chains the cfd- sub-skills end-to-end — literature → hypothesis → mesh-gate → experiments → analysis → paper. Routes to code-mod / open-ended / general subflows based on intent. Self-contained — embeds MetricSetupAgent + MetricSetupVerifier prompts verbatim for the…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Convert hypotheses (or a direct simulation request) into FoamAgent-ready user-requirement strings, one per case. Self-contained — embeds the IdeationAgent + HypothesisAgent expert prompts verbatim. Use after cfd-hypothesis (general flow) or directly when the user gave a simulation-only request. Outputs…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Numerical analysis patterns for OpenFOAM run outputs — log parsing, D²-law fits, slope/RMSE/Richardson extrapolation, residual-plateau checks, drift checks. Self-contained — the agent writes 30-line Python snippets via Bash using these patterns. No Python wrapper.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Generate PyVista figures from a CFD case. Two modes — interpret (per-case diagnostics for cfd-interpret) and full (publication-quality cross-case figures for cfd-paper). Self-contained — embeds vizquality and vision QA prompts verbatim. Agent writes and runs the PyVista script directly; the batch helper is optional.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Custom OpenFOAM model implementation entry — alias for cfd-skills/cfd-code-modify. Use when the user wants to implement, modify, or add a custom viscosity / turbulence / source term / fvOption inside a case-local customModels directory. The full self-contained recipe (with the OPENFOAM 10 LITERATURE CHANGE AGENT v2…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

LangGraph-mode runtime contract for scripts/foamrun.py — preserves Foam-Agent RAG and prompt behavior. For skill-mode case generation, use cfd-skills/cfd-foamagent/SKILL.md instead (fully self-sufficient, agent-driven, no foamrun.py wrapper).

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Mesh independence study using rapid mesh-sensitivity assessment with Richardson extrapolation and GCI. Follows the mesh sensitivity protocol exactly.

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Top-level CFD scientist orchestrator. Reads a user CFD topic, picks one route, initializes a run directory, and invokes the first skill of a fixed chain. From that point on, every per-stage skill's ## Next block names the next skill, and the agent walks the chain to a finished paper. No user shell commands between…

csml-rpi/AI-CFD-Scientist

Skill Claude CodeCodex

Top-level CFD research entry — alias for cfd-skills/cfd-pipeline (general path). Use when the user gives a CFD research topic and wants the full literature → hypothesis → mesh-gate → experiments → analysis → paper flow. The full self-contained recipe lives in cfd-skills/cfd-pipeline/SKILL.md.