Command Claude Code
Compile literature, meeting notes, session logs, and code findings into a structured per-project knowledge wiki. Use when project evidence is scattered across source records and needs synthesis into durable articles. Not for promoting existing articles into the global vault wiki; use $wiki-grow.
Command Claude Code
Scaffold, execute, analyse, and publish computational research experiments through a reproducible staged workflow. Use when a research question requires simulations or computational sweeps rather than a one-off script.
Command Claude Code
Replicate a quantitative analysis in a second language (R↔Python↔Stata↔Julia) and compare outputs for implementation errors. Use when an existing empirical result needs independent cross-language verification. Not for reviewing one implementation in place; use $code-suite.
Command Claude Code
Deliver an end-to-end analysis pipeline: EDA, estimation, or publication output. Use when the user requests an end-to-end analysis pipeline: EDA, estimation, or publication output.
Command Claude Code
Adversarially challenge research assumptions, mechanisms, and arguments in writing. Use when stress-testing a claim or design before committing to it. Not for an interactive oral drill or a full referee report; use $grill-me or a review agent.
Command Claude Code
Review user-facing documentation for accuracy, consistency, and completeness across private, public, nested repos, and the user manual. Use when docs feel stale, after major changes, or before sharing. (Replaces repo-doc-audit).
Command Claude Code
Create, read, edit, or convert Microsoft Word documents while preserving professional document structure. Use when a .docx file is a primary input or requested output, including tracked changes, comments, images, headings, page furniture, or polished reports and letters. Not for PDFs, spreadsheets, Google Docs, or…
Command Claude Code
Design empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture. Use when specifying sampling, measurement, treatment, or analysis before data collection. Not for causal identification alone; use $causal-design.
Command Claude Code
Run an interactive one-question-at-a-time oral drill for research defence or active-recall study, escalating around weak answers and ending with a study sheet. Use when the user asks to be grilled, quizzed, or prepared for a viva, job talk, seminar, or exam. Not for a written critique; use $devils-advocate or a review…
Command Claude Code
Create, accept, or update the persistent .context/ai-handoff.md state shared by AI sessions and machines. Use when continuing in a new Claude or Codex session, transferring work between clients, or recording ownership and restart state.
Command Claude Code
Capture and integrate improvement ideas for the shared Claude Code and Codex infrastructure. Use when recording an infrastructure enhancement for later review rather than implementing it immediately.
Command Claude Code
Bootstrap a university course or module folder with the canonical teaching structure, guidance, and starter files. Use when creating or migrating a course workspace. Not for checking an existing course without modifying it; use $audit-project-course.
Command Claude Code
Bootstrap a lightweight project with minimal guidance, context, and repository structure. Use when a small non-research project needs durable AI collaboration without the full research or course scaffold. Not for formal research projects; use $init-project-research.
Command Claude Code
Create or migrate project-level agents, repeatable project workflows, and planning state from one client-neutral contract, then render repository-scoped adapters for both Claude Code and Codex. Use when a research project needs role separation, project commands, formal phase tracking, or conversion from an existing…
Command Claude Code
Archive an exported Claude Code insights HTML report and turn it into a timestamped Beamer presentation usable from either client. Use when the insights export is the source artifact for a presentation. Not for a general research talk; use $talk-deck.
Command Claude Code
Conduct an adaptive structured interview that elicits tacit knowledge, requirements, preferences, or decisions and summarizes them explicitly. Use when the needed information is in the user's head and cannot be recovered from project files. Not for adversarial oral examination; use $grill-me.
Command Claude Code
Lint an existing project knowledge base for contradictions, uncited claims, missing connections, stale articles, and orphaned concepts. Use when checking the integrity of already compiled knowledge before relying on or expanding it. Not for compiling raw sources; use $compile-knowledge.
Command Claude Code
Compare two LaTeX files, project directories, or Git revisions and produce human-readable plus machine-readable severity-graded semantic changes. Use when determining what changed between manuscript versions or preparing a revision audit bundle. Not for proofreading one version; use $proofread.
Command Claude Code
Compile all LaTeX projects and report cross-project build consistency. Use when checking whether a collection of papers builds cleanly. Not for rendered visual inspection after a clean build; use $latex-polish.
Command Claude Code
Inspect a cleanly compiling LaTeX document for source pathologies and rendered visual defects by linting and viewing selected PDF pages. Use when compilation succeeds but title pages, floats, tables, figures, or layout still need publication-quality review. Not for basic compilation health; use $latex-health-check.
Command Claude Code
Create a large-format academic poster in LaTeX using beamerposter, tikzposter, or baposter. Use when the requested deliverable is a conference or research poster rather than sequential presentation slides. For slide decks, use $beamer-deck.
Command Claude Code
Convert an existing Markdown manuscript draft into a buildable LaTeX project with canonical structure and build configuration. Use when prose already exists but no LaTeX source tree does. Not for checking template drift in an existing project; use $latex-template.
Command Claude Code
Compare a project's LaTeX preamble and conventions against the canonical working-paper template. Use when diagnosing template drift without converting venue formats or editing prose.
Command Claude Code
Compile one specified LaTeX document, resolve build errors, audit citations, and report build quality. Use when a .tex source must be built or a concrete compilation failure repaired. Not for corpus-wide build checks, visual polish after a clean build, or creating a project; use $latex-health-check, $latex-polish, or…