lirabenjamin/claude-code-for-researchers
Instructions file
Claude Code instructions for lirabenjamin/claude-code-for-researchers, covering claude.md, what this directory is, running example, agenda and files in this directory.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
End-of-data-collection workflow. Exports raw MongoDB data as JSONL, writes a companion README documenting schema + provenance, commits both to the repo, and archives the raw dataset to Zenodo with a permanent DOI. Use when the user says "data collection is done", "freeze the data", "archive the raw data", "post the…
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Write an AsPredicted pre-registration for a study. Walk through each field with the user, then produce a complete pre-registration document.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
This is default workflow for data analysis. It includes steps for data cleaning, exploration, and visualization.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Interact with Google Workspace (Drive, Docs, Sheets, Gmail, Calendar, etc.) using the gws CLI. Use this skill when the user wants to read, create, edit, or search Google Docs, Sheets, Drive files, or any Google Workspace resource.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Skill "latex-gdoc-roundtrip" from lirabenjamin/claude-code-for-researchers, covering latex ↔ google docs roundtrip, when to use, phase 1: latex → google docs ("push"), step 1: read the compiled pdf and step 2: identify figures.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Skill "latex-workflow" from lirabenjamin/claude-code-for-researchers, covering latex reproducible workflow, core principle, overall pipeline, 1) project structure (required) and 2) numbers: script-generated macros + helper function.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
End-of-session wrap-up — updates todo.md, comms.md, and currentstate.md with session summary, commits/pushes if git repo, and creates a handoff briefing for the next session. Use when the user says "log off", "wrap up", "call it a night", "done for today", or is ending a work session.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Send the user an iMessage notification when a long-running task finishes. Use after any multi-step or long-running task, especially one the user has stepped away from.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Search for and rank job openings, grants, prizes, and fellowships relevant to the user's profile. Produce a structured markdown report saved to disk.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Audit a research data-code-output-manuscript pipeline for correctness and consistency. Use this skill whenever the user wants to verify their analysis pipeline, check for bugs in statistical code, find hardcoded numbers in a manuscript, or ensure narrative descriptions match the actual results. Trigger phrases include…
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Weekly plate check — pulls from Gmail, Google Calendar, Reclaim, todo.md, and CLAUDE.md to give the user a comprehensive briefing, triage stale tasks, flag conflicts, and generate a visual dashboard. Use when the user wants a status update, weekly review, or says "what's on my plate".
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Build a Qualtrics survey from specs using the qualtricssdk Python package. Give a description of your survey (questions, blocks, logic, embedded data) and this skill generates and runs a Python script to create it on Qualtrics.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Create a single Quarto HTML document that contains multiple pre-rendered versions of an analysis (e.g. different datasets or model specifications), switchable via client-side JavaScript buttons — no re-render needed.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Scaffold and deploy a full-stack behavioral research survey (React + Express + MongoDB) on Render. Supports between-subjects conditions, phased survey flows, AI-assisted tasks, bot detection, keystroke tracking, and platform integrations (Prolific, CloudResearch Connect, Gallup). User describes conditions, stimuli…
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Skill "research-writing" from lirabenjamin/claude-code-for-researchers, covering purpose, 1. core writing philosophy, 2. voice & style rules, active voice and strong topic sentences.
lirabenjamin/claude-code-for-researchers
Skill Claude CodeCodex
Fill out Wharton Behavioral Lab (WBL) study submission forms on JotForm. Use this skill whenever the user mentions WBL forms, study submission forms, scheduling a study launch, MKT form, OID form, Wharton Behavioral Lab, or wants to submit a study to the lab. Also trigger when user pastes a filled-in markdown template…