mahmoodlab

mahmoodlab/TRIDENT

Skill Claude CodeCodex

Process whole-slide pathology images (WSIs) with TRIDENT: tissue segmentation, patch coordinate extraction, and patch/slide feature (embedding) extraction with foundation models (UNI, CONCH, Virchow, Gemma, Titan, GigaPath, etc.). Use when the user works with WSIs (.svs/.tiff/.ndpi/.mrxs/.czi/.dcm), mentions TRIDENT…