musharna

19 mods across 7 repositories, 19 stars between them.

plant-genomics

01

musharna/plant-genomics-mcp

MCP server Claude CodeCodexCursor +2

Plant genomics MCP — 56 tools across 23 live backends (Ensembl Plants, Phytozome, UniProt, Europe PMC, QuickGO, Planteome, PlantCyc/PMN, g:Profiler, AlphaFold, PDBe, InterPro, JASPAR, ThaleMine, PANTHER, OrthoDB, AraGWAS, 1001 Genomes, BLAST, Gramene, KEGG, STRING, ATTED-II, BAR) for MCP clients. Runs locally from the…

not rated 7 4d ago A tokens not measured original MIT

plant-genomics-mcp

02

musharna/plant-genomics-mcp

MCP server Claude CodeCodexCursor +2

Plant genomics MCP — 56 tools across 23 live backends (Ensembl Plants, Phytozome, UniProt, Europe PMC, QuickGO, Planteome, PlantCyc/PMN, g:Profiler, AlphaFold, PDBe, InterPro, JASPAR, ThaleMine, PANTHER, OrthoDB, AraGWAS, 1001 Genomes, BLAST, Gramene, KEGG, STRING, ATTED-II, BAR) for MCP clients. Runs locally from the…

not rated 7 4d ago A tokens not measured original MIT

jobd

03

musharna/jobd

MCP server Claude CodeCodexCursor +2

MCP server "jobd" as configured in musharna/jobd. Runs locally from the jobd[mcp] Python package.

not rated 5 5d ago A tokens not measured original MIT

data-aggregator

04

musharna/data-aggregator-mcp

MCP server Claude CodeCodexCursor +2

Research-data acquisition MCP — find and fetch datasets across archives, omics registries, and literature. Runs locally from the data-aggregator-mcp Python package.

not rated 4 today A tokens not measured original MIT

data-aggregator-mcp

05

musharna/data-aggregator-mcp

MCP server Claude CodeCodexCursor +2

Research-data acquisition MCP — find and fetch datasets across archives, omics registries, and literature. Runs locally from the data-aggregator-mcp Python package. Needs 12 environment variables to run.

not rated 4 today A tokens not measured original MIT

ldraw

06

musharna/ldraw-mcp

MCP server Claude CodeCodexCursor +2

MCP server that renders LDraw/LEGO models to images with real part geometry via headless Blender + ImportLDraw, and answers bill-of-materials, colour and part queries. Runs locally from the ldraw-mcp Python package.

not rated 3 15d ago A tokens not measured original MIT

ldraw-mcp

07

musharna/ldraw-mcp

MCP server Claude CodeCodexCursor +2

MCP server that renders LDraw/LEGO models to images with real part geometry via headless Blender + ImportLDraw, and answers bill-of-materials, colour and part queries. Runs locally from the ldraw-mcp Python package. Needs 2 environment variables to run.

not rated 3 15d ago A tokens not measured original MIT

breedsim

08

musharna/breedsim-mcp

MCP server Claude CodeCodexCursor +2

MCP server for breeding-scheme simulation — returns distributions, never a single stochastic run. Runs locally from the breedsim-mcp Python package.

not rated 0 10d ago A tokens not measured GPL-3.0

breedsim-mcp

09

musharna/breedsim-mcp

MCP server Claude CodeCodexCursor +2

MCP server for breeding-scheme simulation — returns distributions, never a single stochastic run. Runs locally from the breedsim-mcp Python package. Needs 1 environment variable to run.

not rated 0 10d ago A tokens not measured GPL-3.0

phylokit

10

musharna/phylokit-mcp

MCP server Claude CodeCodexCursor +2

MCP server for phylogenetic inference — never returns a topology without its support. Runs locally from the phylokit-mcp Python package.

not rated 0 5d ago A tokens not measured GPL-2.0

phylokit-mcp

11

musharna/phylokit-mcp

MCP server Claude CodeCodexCursor +2

MCP server for phylogenetic inference — never returns a topology without its support. Runs locally from the phylokit-mcp Python package. Needs 2 environment variables to run.

not rated 0 5d ago A tokens not measured GPL-2.0

plantcv

12

musharna/plantcv-mcp

MCP server Claude CodeCodexCursor +2

MCP server exposing PlantCV as a measurement instrument — traits plus the segmentation overlay they came from. Runs locally from the plantcv-mcp Python package.

not rated 0 10d ago A tokens not measured original MIT

plantcv-mcp

13

musharna/plantcv-mcp

MCP server Claude CodeCodexCursor +2

MCP server exposing PlantCV as a measurement instrument — traits plus the segmentation overlay they came from. Runs locally from the plantcv-mcp Python package.

not rated 0 10d ago A tokens not measured original MIT