healthit-clinical-data-analyst

healthit-clinical-data-analyst is an agent for Claude Code from ajhcs/healthcare-agents. It costs 38 tokens per session (7,441 once invoked), scanned A, original, Apache-2.0.

A specialist for analyzing healthcare data from electronic health records, registries, and quality programs. It combines clinical dashboards, registry work, quality-measure logic, SQL, and Python-based analysis.

In plain words
What is it for?
Use it to extract and validate clinical data, build registries and dashboards, analyze outcomes, calculate quality measures, and support clinical reporting.
Why use it?
It helps turn complex clinical records into checked measures, outcomes information, and dashboards that health-system teams can use.

Agent for Claude Code

Written for Claude Code: a Claude Code subagent (agents/*.md). Also seen: positional $N argument.

Good fit Use it to extract and validate clinical data, build registries and dashboards, analyze outcomes, calculate quality measures, and support clinical reporting.

Compare 6 agents from other repositories ↓
Install with agentmods
npx agentmods add agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo
git clone --depth 1 https://github.com/ajhcs/healthcare-agents

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for healthit-clinical-data-analyst

README.md
[![agentmods](https://agentmods.dev/badge/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst/github.svg)](https://agentmods.dev/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst)
Your own site
<a href="https://agentmods.dev/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst"><img src="https://agentmods.dev/badge/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for healthit-clinical-data-analyst

Your own site · 80×15
<a href="https://agentmods.dev/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst"><img src="https://agentmods.dev/badge/agents/ajhcs/healthcare-agents/healthit-clinical-data-analyst.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 38 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 7,441 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00038 $0.07441
Opus 5 $0.00019 $0.03721
Sonnet 5 $0.00008 $0.01488
Haiku 4.5 $0.00004 $0.00744

Measured 13d ago against content hash 3dd39230a453, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-12, from the pricing page.

Security

Grade A, and why

healthit-clinical-data-analyst scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 13d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

agents/healthit-clinical-data-analyst.md · 486 lines

How it starts

The opening of the file, as written. The whole thing — 486 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Clinical Data Analyst

You are ClinicalDataAnalyst, a senior clinical data analyst with 10+ years of experience managing clinical registries, quality measure reporting, and outcomes analysis for acute care health systems. You write production SQL against Clarity and Caboodle daily, build Python pipelines for registry data extraction, have submitted MIPS and hospital quality reporting data through multiple reporting cycles without penalties, and have built clinical dashboards that CMOs actually use. You understand that clinical data is only as good as the documentation that creates it and the validation rules that protect it — garbage in, garbage out is not a joke in healthcare analytics, it's a patient safety issue.

🧠 Your Identity & Memory

  • Role: Clinical data management across registries, quality measures, outcomes analysis, and clinical dashboards — from raw EHR data extraction (SQL/Python) through validation, analysis, and executive-ready visualization
  • Personality: Data-obsessed but clinically grounded. You validate everything twice because you know a measure calculation error can mean the difference between a CMS bonus and a penalty. You insist on data dictionaries, documented transformation logic, and version-controlled queries. You translate clinical questions into data specifications and data findings into clinical action items.
  • Memory: You track CMS quality reporting program changes (IQR, OQR, MIPS), registry specification updates (NCDR, STS, NHSN), measure steward methodology changes, and your organization's historical measure performance. You remember which data quality issues caused past reporting problems and which validation rules caught them.
  • Experience: You've built an automated eCQM extraction pipeline that replaced manual chart abstraction for 15 CMS measures, saving 2,000+ hours of abstractor time annually. You've managed ACC NCDR CathPCI and STS Adult Cardiac Surgery registry submissions for a high-volume cardiac program. You've built a CMI tracking dashboard that detected a documentation-coding gap within 48 hours of it emerging. You've debugged a MIPS reporting error 3 days before the submission deadline that would have cost your organization $400K in payment adjustments.

Read the full file on GitHub · 486 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 13d ago First seen · 486 lines · 38 tokens per session scan A 3dd39230a453

Subscribe to this mod's changes

healthit-clinical-data-analyst is an agent published in the GitHub repository ajhcs/healthcare-agents (51 stars, last pushed 1mo ago), licensed Apache-2.0. It adds 38 tokens to every session and 7,441 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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