Eureka39/CARS

Collaborative Academic Research System based on Claude Code and MCP.

23Stars on the repository
22Mods indexed here, across every type
1mo agoLast push, which is what freshness is scored on
noneNo LICENSE: all rights reserved, so bodies are not copied

blueprint_agent

01

Eureka39/CARS

Agent

Research blueprint compiler. Converts Supervised Layer 5 convergence insights into structured execution specifications for downstream research modules (Experiment Agent, Code Agent, Paper Writing Module).

23 1mo ago A 35 tokens

deep_reader_agent

02

Eureka39/CARS

Agent

Calls the deepreadpdfs MCP tool in cruncher.py to batch deeply read PDF papers into structured Markdown reports.

23 1mo ago A 26 tokens

Eureka39/CARS

Agent

Reads deep-reading Markdown reports output by cruncher.py, parses structured content (including problematization fields), converts it to JSON format (v2.0.0), and stores it in hypotheses/translated/ for downstream Matrix Engine consumption.

23 1mo ago A 54 tokens

batch_fetch_agent

04

Eureka39/CARS

Agent

Receives the filtered list of paper IDs, calls the Semantic Scholar batch API to download full metadata, saves individual JSON files, downloads open-access PDFs, and maintains a consolidated metadata file.

23 1mo ago A 40 tokens

Eureka39/CARS

Agent

Master control agent of the Literature Scout module. Interacts with the user and coordinates the four sub-agents: querybuilder, seedexpander, relevancejudge, and batchfetch to complete the entire literature search process.

23 1mo ago A 50 tokens

query_builder_agent

06

Eureka39/CARS

Agent

Extracts keywords from userprofile, generates multi-perspective natural language queries, calls the Semantic Scholar API to search for papers, and outputs a deduplicated candidate paper set.

23 1mo ago A 39 tokens

Eureka39/CARS

Agent

Reads candidate paper collections, performs confidence scoring based on the match between abstract content and the user's research direction; high confidence automatically triggers download, while medium/low confidence is shown to the user for decision.

23 1mo ago A 46 tokens

seed_expander_agent

08

Eureka39/CARS

Agent

Reads searchseeds from userprofile, calls Semantic Scholar recommendation API to expand relevant literature based on seed papers, deduplicates, and outputs a candidate paper set.

23 1mo ago A 37 tokens

matrix_engine_agent

09

Eureka39/CARS

Agent

Reads structured paper JSONs, extracts problem × method axes, builds a taxonomy-based matrix, identifies research gaps with problematization analysis, outputs matrix.json, and automatically calls MCP tool to export CSV visualization.

23 1mo ago A 45 tokens

profile_agent

10

Eureka39/CARS

Agent

Reads the latest Socratic session and existing userprofile.json, extracts/merges cognitive materials, incrementally updates the global profile, and synchronizes the project README.

23 1mo ago A 37 tokens

Eureka39/CARS

Agent

Challenges assumptions at key Socratic dialogue nodes, tests logic chains, and identifies bias. It is a sub-agent called by socraticmentoragent.

23 1mo ago A 38 tokens

Eureka39/CARS

Agent

Use Socratic questioning to extract raw cognitive material from the user. Supports both zeroshot (cold start) and supervised (hot start) modes.

23 1mo ago A 37 tokens

Eureka39/CARS

Agent

After each user reply, decide whether the dialogue should stay, progress, redirect, or regress. Supports both zeroshot and supervised modes with different layer definitions and exit signals.

23 1mo ago A 41 tokens

Eureka39/CARS

Agent

Review question quality before the Socratic mentor asks; ensure questions match layer depth and protocol rules for both zeroshot and supervised modes.

23 1mo ago A 33 tokens