biostat-emergence

biostat-emergence is an agent for Claude Code from lyndonkl/claude. It costs 131 tokens per session (1,320 once invoked), scanned A, original, no licence file.

A tool for finding natural groups in a biostatistics knowledge vault. It reads the links between evergreen notes—long-lived notes about reusable ideas—and suggests a structure note when at least four related notes form a real cluster.

In plain words
What is it for?
Use it to discover themes in a knowledge graph, create structure notes for mature groups of ideas, and flag oversized clusters for reorganisation.
Why use it?
It helps organise knowledge based on connections that have emerged over time instead of forcing a structure too early. It also identifies clusters that have become too large and may need splitting.

Agent for Claude Code

Written for Claude Code: shipped in a Claude Code plugin. Also seen: model in frontmatter.

Part of the thinking-frameworks-skills plugin — 62 skills, 85 agents, 2 hooks shipped together

Good fit Use it to discover themes in a knowledge graph, create structure notes for mature groups of ideas, and flag oversized clusters for reorganisation.

Compare 6 agents from other repositories ↓
Install with agentmods
npx agentmods add agents/lyndonkl/claude/biostat-emergence
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo
git clone --depth 1 https://github.com/lyndonkl/claude

Made for: Claude Code.

Or install thinking-frameworks-skills, the plugin that ships this one along with the rest of its 62 skills, 85 agents, 2 hooks.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for biostat-emergence

README.md
[![agentmods](https://agentmods.dev/badge/agents/lyndonkl/claude/biostat-emergence/github.svg)](https://agentmods.dev/agents/lyndonkl/claude/biostat-emergence)
Your own site
<a href="https://agentmods.dev/agents/lyndonkl/claude/biostat-emergence"><img src="https://agentmods.dev/badge/agents/lyndonkl/claude/biostat-emergence/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for biostat-emergence

Your own site · 80×15
<a href="https://agentmods.dev/agents/lyndonkl/claude/biostat-emergence"><img src="https://agentmods.dev/badge/agents/lyndonkl/claude/biostat-emergence.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 131 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 1,320 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00131 $0.01320
Opus 5 $0.00066 $0.00660
Sonnet 5 $0.00026 $0.00264
Haiku 4.5 $0.00013 $0.00132

Measured 9d ago against content hash 5ec0c10ada49, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

biostat-emergence scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

agents/biostat-emergence.md · 40 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 9d ago First seen · 40 lines · 131 tokens per session scan A 5ec0c10ada49

Subscribe to this mod's changes

biostat-emergence is an agent published in the GitHub repository lyndonkl/claude (155 stars, last pushed 8d ago), with no licence file. It adds 131 tokens to every session and 1,320 once invoked, about $0.0007 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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