biostat-lab

biostat-lab is an agent for Claude Code from lyndonkl/claude. It costs 169 tokens per session (1,304 once invoked), scanned A, original, no licence file.

A mentor for hands-on biostatistics projects and capstone projects using real genomics and phenotype data. It helps design projects, run and review analysis code, and check that machine-learning results are evaluated honestly.

In plain words
What is it for?
Use it to plan and review projects, analyse genomics or phenotype datasets, run machine-learning experiments, and check cross-validation and data handling.
Why use it?
It helps learners move from concepts to analysis while guarding against two common problems: data leakage and unreliable model evaluation through weak cross-validation.

Agent for Claude Code

Written for Claude Code: shipped in a Claude Code plugin. Also seen: model in frontmatter.

Part of the thinking-frameworks-skills plugin — 62 skills, 85 agents, 2 hooks shipped together

Good fit Use it to plan and review projects, analyse genomics or phenotype datasets, run machine-learning experiments, and check cross-validation and data handling.

Compare 6 agents from other repositories ↓
Install with agentmods
npx agentmods add agents/lyndonkl/claude/biostat-lab
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo
git clone --depth 1 https://github.com/lyndonkl/claude

Made for: Claude Code.

Or install thinking-frameworks-skills, the plugin that ships this one along with the rest of its 62 skills, 85 agents, 2 hooks.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for biostat-lab

README.md
[![agentmods](https://agentmods.dev/badge/agents/lyndonkl/claude/biostat-lab.svg)](https://agentmods.dev/agents/lyndonkl/claude/biostat-lab)
Your own site
<a href="https://agentmods.dev/agents/lyndonkl/claude/biostat-lab"><img src="https://agentmods.dev/badge/agents/lyndonkl/claude/biostat-lab.svg" alt="Measured on agentmods" height="20"></a>
Per session 169 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 1,304 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00169 $0.01304
Opus 5 $0.00084 $0.00652
Sonnet 5 $0.00034 $0.00261
Haiku 4.5 $0.00017 $0.00130

Measured 8d ago against content hash da0ae94a9929, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

biostat-lab scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

agents/biostat-lab.md · 35 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 8d ago First seen · 35 lines · 169 tokens per session scan A da0ae94a9929

Subscribe to this mod's changes

biostat-lab is an agent published in the GitHub repository lyndonkl/claude (155 stars, last pushed 6d ago), with no licence file. It adds 169 tokens to every session and 1,304 once invoked, about $0.0008 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Related

Other agents, from other repositories

experiment-reviewer

Experiment Reviewer (QA). Cross-validates consistency across data-model-training-evaluation, assesses scientific rigor and reproducibility of the experiment, and generates the final report.

revfactory/harness-100 · 36 tokens

nn-embedding-expert

Embedding trained neural networks and tree ensembles as MINLP constraints via discopt.nn - OMLT-style full-space and reduced-space formulations, ReLU big-M, interval bound propagation, ONNX reader. Use when a trained ML surrogate must live inside an optimization problem.

jkitchin/discopt · 59 tokens

staff-data-sci

Personas are Opus-only. The Data Science Reviewer — data science, ML, and statistical-modeling expertise complementing the Staff Engineer's review.

dbc-oduffy/coordinator-claude · 35 tokens

structured-data-worker

Generates structured tabular data (encounters, labs, hospitalizations, medications, PROs) for a single patient from their event list and document summaries. Reads table schemas from YAML files. Writes JSON output to a specified path. Spawned by the generate-synthetic-data skill -- do not invoke directly.

kenlkehl/onc-data-wrangler-plugin · 66 tokens

ml-engineer

Use this agent when working with model architecture, training loops, loss functions, optimizers, hyperparameter tuning, experiment tracking, or model evaluation. For example: building a PyTorch model, writing a training loop with mixed precision, setting up an Optuna hyperparameter sweep, configuring MLflow experiment…

morganmuli/metaskill · 81 tokens

bayesian-network-prediction

Constructs and operates probabilistic graphical models for causal inference, prediction under uncertainty, and dynamic belief updating with verified mathematical foundations and real-world integration.

ChrisRoyse/610ClaudeSubagents · 35 tokens