Code graphs, wikis, and research-backed agentic coding. Deterministic tools for nondeterministic workflows, in one opinionated Claude Code config.
Command Claude Code
Triage open GitHub issues — suggest labels for each (you approve), and run a two-stage staleness lifecycle on issues waiting on the reporter: nudge at 14 days, close at 30. Repo-local to atomic-claude. Never auto-acts; every label, nudge, and close needs your OK.
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Use the agent tool with.
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This command documents how to dispatch. Example only.
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Use the agent tool with.
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Code graphs, wikis, and research-backed agentic coding. Deterministic tools for nondeterministic workflows, in one opinionated Claude Code config.
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Route a lost user to the right atomic verb, skill, agent, or binary subcommand. Bare invocation reads git state and recommends one next step. Topic keyword or freeform intent → focused pointer. tour → guided walkthrough of the system. Help router, not duplicated docs.
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Write a design doc (concepts, business rules, approaches) and a checkpoint-table spec (contract) for non-trivial work; inline spec only for trivial. Gauges triviality; loops spec authoring with subagents. Human-facing artifact, Mermaid diagrams allowed.
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Autonomous end-to-end feature delivery — plan, then the subagent implement→review loop, then ship. Hands-off except one decision: how to merge. Always uses /subagent-implementation, addresses every reviewer finding in-iteration (nothing deferred), may auto-dispatch atomic-strategist for read-only root-cause analysis…
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Multi-lens design challenger. Reads a design/spec/plan/proposal, profiles it (who can reach it, whose data, what being wrong costs), then seats 3-6 expert lenses from a 30-lens catalog spanning engineering, data/ML, business, finance, communication, and delivery — each seated only with a cited stake, reflexive picks…
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Stage, commit, and optionally ship further. Pass an escalation token (push, pr, merge, squash, squash merge) to skip the prompt. With no token, commits then asks how far to ship. Delegates message format to the atomic-git-discipline skill.
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Bootstrap and maintain project documentation surfaces. Two modes: bootstrap (discover doc files, index them in CLAUDE.md) and authoring (scan for unindexed docs, match diff against indexed surfaces, walk stale/incomplete/missing items with Yes/Later/Remind/Skip).
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Review and act on pending reminders. Bare invocation shows all reminders as an indexed list; cron-fired invocation (/follow-up due ) surfaces the specific reminder and waits for a response; /follow-up review lists stale project follow-up entries for per-item disposition (extend/close/promote/skip). Transport-aware…
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Pre-design evidence gathering. Takes a hunch or hypothesis and chases it through primary sources (context7, official docs, source code, ast-grep, run-it experiments) before any spec is written. Returns SUPPORTED / UNSUPPORTED / MIXED / INCONCLUSIVE with cited evidence trail. Pairs with /pressure-test and precedes…
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Scan and clean up stale git state — worktrees, local branches, optionally remote tracking refs. Dispatches a read-only scan via atomic prompt git-cleanup, presents an indexed report, asks user which to clean. No destructive ops without explicit confirmation. Defaults: 30-day staleness, local-only.
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Socratic challenger for design decisions. Pressure-tests assumptions, surfaces contradictions, forces fuzzy maybes into yes/no — through questions only, never producing code or artifacts. Pairs with /atomic-plan as a pre-approval gate.
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Run the implement→review subagent loop without the planning phase — for straightforward fixes with a known cause and one obvious approach, regardless of how many files the change spreads across. Skips the spec gate, worktree gate, and finalize ceremony (implementation log, docs, signals) that /subagent-implementation…
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Refresh the project wiki. Handles both repo scope (docs/wiki/ inside the current repo) and realm scope (a cross-repo wiki at /wiki/). Scope auto-detected from block or directory structure. Dispatches atomic-wiki-inferrer, which reads the matching pipeline reference and executes it.
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Schedule a reminder. Creates a reminder file and schedules it via cron ( = 1h). Degrades silently to file-only when scheduling tools are unavailable.
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Open an issue against the atomic-claude repo itself (bugs/feature requests with the installed config, not the user's current project).
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Open a atomic GitHub issue via gh. Bug report or feature request — auto-detect from user's description.
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Session retrospective. Mines .jsonl history and this conversation for friction, corrections, and misbehavior; cross-references installed artifacts; walks findings one at a time. Persists a run log so later runs detect drift. Use after long sessions or repeated friction.
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Review the current branch's diff against base by dispatching atomic-reviewer. No orchestration loop, no spec required — pre-flight before /commit pr or /commit merge.
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Capture what changed this session and why, scoped to the current branch. Read by ship verbs when synthesizing the commit message; deleted after a successful commit.
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Bootstrap the current repo for atomic-claude use. Audits .gitignore entries, docs/ layout, and presence of CLAUDE.md. Proposes only what's missing — never overwrites. No commits.