SessionStart

A startup check that runs a Python command when a coding-agent session begins. It reports whether the CellTypePilot package is installed and ready.

In plain words
What is it for?
Use it to check CellTypePilot availability at session start and show an installation command when it is missing.
Why use it?
It gives an immediate indication that the required biology-analysis software is available instead of discovering the problem later.

Hook

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add hooks/herry423/celltypepilot/session-start
Clone the repo
git clone --depth 1 https://github.com/HERRY423/CellTypePilot
Per session not measured What this adds to a session before it is invoked.
When invoked not measured Not applicable: nothing here is loaded into a session.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Security

Grade A, and why

SessionStart scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured yesterday.

A static scan of the commands this hook runs, not an audit. A hook is shell that executes on your machine at the event it names, which is why every command in it is printed with what was found.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

hooks/hooks.json · 14 lines

What it actually says

{
  "SessionStart": [
    {
      "matcher": "*",
      "hooks": [
        {
          "type": "command",
          "command": "python -c \"import celltypepilot; print(f'CellTypePilot {celltypepilot.__version__} ready')\" 2>&1 || echo 'CellTypePilot backend not installed — run: pip install celltypepilot'",
          "timeout": 10
        }
      ]
    }
  ]
}
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. yesterday First seen · 14 lines scan A 1430da000c8c

Subscribe to this mod's changes

SessionStart is a hook published in the GitHub repository HERRY423/CellTypePilot (5 stars, last pushed 8d ago), licensed MIT. Its token cost is not measured: a hook is shell that never enters the context. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.