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marcorusc/mcp-biomodelling-servers

A repository that stores all the MCP servers for creating biological mechanistic models. It includes server for NeKo, MaBoSS, PhysiCell/PhysiBoSS.

This repository also configures its own agents. See what mcp-biomodelling-servers tells them →

Open on GitHub
20Stars on the repository
4Mods indexed here, across every type
2d agoLast push, which is what freshness is scored on
GPL-3.0Licence, which decides whether bodies are shown
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MaBoSS

01

marcorusc/mcp-biomodelling-servers

MCP server Claude CodeCodexCursor +2

One of 3 in server.json

MCP servers for NeKo signalling-network construction, MaBoSS Boolean simulation, PhysiCell configuration, and BioMASS ODE construction. Runs locally from the mcp-biomodelling-servers Python package.

not rated 20 +1 2d ago A tokens not measured GPL-3.0

NeKo

02

marcorusc/mcp-biomodelling-servers

MCP server Claude CodeCodexCursor +2

One of 3 in server.json

MCP servers for NeKo signalling-network construction, MaBoSS Boolean simulation, PhysiCell configuration, and BioMASS ODE construction. Runs locally from the mcp-biomodelling-servers Python package.

not rated 20 +1 2d ago A tokens not measured GPL-3.0

PhysiCell

03

marcorusc/mcp-biomodelling-servers

MCP server Claude CodeCodexCursor +2

One of 3 in server.json

MCP servers for NeKo signalling-network construction, MaBoSS Boolean simulation, PhysiCell configuration, and BioMASS ODE construction. Runs locally from the mcp-biomodelling-servers Python package.

not rated 20 +1 2d ago A tokens not measured GPL-3.0