A local bridge to the STRING-DB API, a database that stores information about relationships between proteins. It runs from a Python package and lets software communicate with that database.

It helps query and use protein-interaction information from the STRING database.

Using a scientific database from a coding-agent workflow can otherwise require custom API integration. This supplies an interface for accessing STRING data.

string-mcp — MCP server by MCPmed

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods

npx agentmods add mcp/mcpmed/stringmcp/string-mcp

Clone the repo

git clone --depth 1 https://github.com/MCPmed/STRINGmcp

Made for: Claude Code, Codex, Cursor, Gemini CLI, OpenCode.

Per session not measured What this adds to a session before it is invoked.

When invoked not measured Not applicable: nothing here is loaded into a session.

Security scan A 0 findings. Scan, not verified.

Origin original No closer match found in the catalogue.

Security

Grade A, and why

string-mcp scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured yesterday.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

listed in the official MCP registry · 8 lines

What it actually says

{ "string-mcp": { "command": "uvx", "args": [ "string-mcp" ] } }

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

yesterday First seen · 8 lines scan A 6cf6e2546cc5

Subscribe to this mod's changes

string-mcp is an MCP server published in the GitHub repository MCPmed/STRINGmcp (3 stars, last pushed 1y ago), licensed BSD-3-Clause. Its token cost is not measured: an MCP server costs its tool schemas, not its config file. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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