A remote MCP server for Seqera Platform, which manages and monitors Nextflow workflow runs on cloud and cluster computing environments.

Use it for Seqera Platform integrations when the server's supported operations are known from its documentation.

The available information only identifies the server and its connection address, so its specific operations are not described.

seqera — MCP server by nextflow-io/agent-skills

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo

git clone --depth 1 https://github.com/nextflow-io/agent-skills

Made for: Claude Code.

Or install nextflow, the plugin that ships this one along with the rest of its 5 skills, 1 command, 1 MCP server.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/mcp/nextflow-io/agent-skills/seqera/github.svg)](https://agentmods.dev/mcp/nextflow-io/agent-skills/seqera)

Your own site

<a href="https://agentmods.dev/mcp/nextflow-io/agent-skills/seqera"><img src="https://agentmods.dev/badge/mcp/nextflow-io/agent-skills/seqera/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

Your own site · 80×15

<a href="https://agentmods.dev/mcp/nextflow-io/agent-skills/seqera"><img src="https://agentmods.dev/badge/mcp/nextflow-io/agent-skills/seqera.svg" alt="Reviewed on agentmods" width="80" height="20"></a>

Per session not measured What this adds to a session before it is invoked.

When invoked not measured Not applicable: nothing here is loaded into a session.

Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.

Origin original No closer match found in the catalogue.

Security

Grade A, and why

seqera scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.mcp.json · 6 lines

What it actually says

{
  "seqera": {
    "type": "url",
    "url": "https://mcp.seqera.io/mcp"
  }
}

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

1mo ago First seen · 6 lines scan A 6acf35d2d725

Subscribe to this mod's changes

seqera is an MCP server published in the GitHub repository nextflow-io/agent-skills (24 stars, last pushed 6d ago), licensed Apache-2.0. Its token cost is not measured: an MCP server costs its tool schemas, not its config file. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Cloud DevOps and cloud LLM agent-skills bioinformatics claude codex cursor

seqera

Getting it into your agent

Wrote this? Show the measurements

Grade A, and why

Nothing flagged

What it actually says

What this file has done since we first saw it

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