A connection to InterPro, a European Bioinformatics Institute service that classifies protein families, domains, and functional sites.

Use it to investigate protein classification, domains, and possible functional sites in bioinformatics work.

It helps you look up biological meaning in protein sequences without manually searching specialist databases.

interpro — MCP server for Claude Code and Codex by pipeworx-io: A connection to InterPro, a European Bioinformatics Institute service…

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods

npx agentmods add mcp/pipeworx-io/mcp-interpro/interpro

Clone the repo

git clone --depth 1 https://github.com/pipeworx-io/mcp-interpro

Made for: Claude Code, Codex, Cursor.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/mcp/pipeworx-io/mcp-interpro/interpro.svg)](https://agentmods.dev/mcp/pipeworx-io/mcp-interpro/interpro)

Your own site

<a href="https://agentmods.dev/mcp/pipeworx-io/mcp-interpro/interpro"><img src="https://agentmods.dev/badge/mcp/pipeworx-io/mcp-interpro/interpro.svg" alt="Measured on agentmods" height="20"></a>

Per session not measured What this adds to a session before it is invoked.

When invoked not measured Not applicable: nothing here is loaded into a session.

Security scan A 0 findings. Scan, not verified.

Origin original No closer match found in the catalogue.

Security

Grade A, and why

interpro scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 4d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

server.json · 6 lines

What it actually says

{
  "interpro": {
    "url": "https://gateway.pipeworx.io/interpro/mcp",
    "type": "streamable-http"
  }
}

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

4d ago First seen · 6 lines scan A f9f9ec4e5ae6

Subscribe to this mod's changes

interpro is an MCP server published in the GitHub repository pipeworx-io/mcp-interpro (0 stars, last pushed 9d ago), licensed MIT. Its token cost is not measured: an MCP server costs its tool schemas, not its config file. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

Scientific interpro mcp mcp-server model-context-protocol pipeworx

interpro

Getting it into your agent

Wrote this? Show the measurements

Grade A, and why

Nothing flagged

What it actually says

What this file has done since we first saw it

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