clinical-reports

clinical-reports is a skill for Claude Code, Codex from agentlas-ai/agentlas-desktop. It costs 55 tokens per session (3,173 once invoked), scanned A, a copy of clinical-reports, Apache-2.0.

A tool for drafting and checking the structure of clinical and research reports using verified, synthetic, de-identified, or aggregate information.

In plain words
What is it for?
It helps prepare report outlines, aggregate tables, source-fact manifests, provenance records, and local checks for case, diagnostic, trial, safety, and research reports.
Why use it?
It catches structural and internal-consistency problems without inventing missing facts or acting as a clinician, regulator, or approver.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit It helps prepare report outlines, aggregate tables, source-fact manifests, provenance records, and local checks for case, diagnostic, trial, safety, and research reports.

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Install with agentmods
npx agentmods add skills/agentlas-ai/agentlas-desktop/clinical-reports
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add agentlas-ai/agentlas-desktop --skill clinical-reports
Clone the repo
git clone --depth 1 https://github.com/agentlas-ai/agentlas-desktop

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for clinical-reports

README.md
[![agentmods](https://agentmods.dev/badge/skills/agentlas-ai/agentlas-desktop/clinical-reports/github.svg)](https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/clinical-reports)
Your own site
<a href="https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/clinical-reports"><img src="https://agentmods.dev/badge/skills/agentlas-ai/agentlas-desktop/clinical-reports/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for clinical-reports

Your own site · 80×15
<a href="https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/clinical-reports"><img src="https://agentmods.dev/badge/skills/agentlas-ai/agentlas-desktop/clinical-reports.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 55 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 3,173 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin 95% copy Near-identical to another mod in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00055 $0.03173
Opus 5.5 $0.00022 $0.01269
Sonnet 5.5 $0.00011 $0.00635
Haiku 4.5 $0.00006 $0.00317

Measured 1mo ago against content hash 2b7819fd95e3, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

clinical-reports scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.

The scan reads SKILL.md. This mod also ships 9 executable files (scripts/_common.py, scripts/check_deidentification.py, scripts/consistency_checker.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

This is a copy

95% identical to clinical-reports — 20 lines differ, which has more behind it and is treated as the original. This page carries a canonical link to it rather than competing with it.

plugins/agentlas-science-skills/skills/clinical-reports/SKILL.md · 266 lines

How it starts

The opening of the file, as written. The whole thing — 266 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Clinical Reports

Purpose

Prepare draft reporting structures, aggregate tables, and review manifests from verified authorized facts. Route each artifact to the correct reporting guidance, preserve provenance, and stop when source support or qualified review is missing.

This skill does not establish legal, regulatory, ethical, journal, accreditation, or institutional compliance. Its scripts check structure and internal consistency only.

Non-Negotiable Boundary

Never:

  • diagnose, recommend treatment, choose or change dosing, triage, or provide return precautions;
  • interpret images, specimens, raw laboratory results, symptoms, or other clinical observations;
  • invent, infer, normalize, “complete,” or silently reconcile observations, results, dates, units, denominators, causality, expectedness, seriousness, outcomes, or conclusions;
  • create an individual case safety report from patient-level narrative or decide reportability;
  • sign, attest, approve, file, transmit, submit, amend a source record, or act as a licensed clinician, pathologist, radiologist, laboratorian, safety physician, statistician, privacy officer, attorney, or regulatory professional;
  • use real PHI in examples, assets, tests, prompts, logs, or external services;
  • call an external LLM, image service, API, or another skill.

All generated artifacts must remain visibly marked:

DRAFT — NOT FOR CLINICAL USE, SIGNATURE, FILING, OR SUBMISSION. Populate only from verified authorized source records. Qualified review and sign-off are required.

If the request crosses a boundary, stop the unsafe portion. Offer a blank structured template, a source-fact manifest, or a deterministic structural check. Direct clinical or regulatory decisions to the responsible qualified professional.

Input Gate

Proceed only when all conditions are true:

  1. Purpose is explicit: publication draft, diagnostic-report scaffold, trial-results manuscript, protocol reporting review, CSR draft, aggregate safety table, or aggregate research summary.
  2. Data class is allowed: synthetic, deidentified, or aggregate.
  3. Authority is documented: the requester is authorized to use the records for the stated purpose.
  4. Local-only handling is feasible: no upload, remote API, telemetry, or credential is needed.
  5. Minimum necessary is defined: exclude fields not needed for the artifact.
  6. Provenance exists: every populated field or claim maps to one or more verified source-fact IDs.
  7. Review owner is identified: qualified clinical, statistical, safety, privacy, legal, journal, and/or regulatory review as applicable.

Read the full file on GitHub · 266 lines

Files

What ships with it

35 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 1mo ago First seen · 266 lines · 55 tokens per session scan A 2b7819fd95e3

Subscribe to this mod's changes

clinical-reports is a skill published in the GitHub repository agentlas-ai/agentlas-desktop (6 stars, last pushed today), licensed Apache-2.0. It adds 55 tokens to every session and 3,173 once invoked, about $0.0002 per session on Opus 5.5. A static security scan graded it A with 0 findings. It is 95% identical to clinical-reports, differing in 20 lines, and is treated as a copy.

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