Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add agentlas-ai/agentlas-desktop --skill ensembl-compara-gene-treegit clone --depth 1 https://github.com/agentlas-ai/agentlas-desktopWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/ensembl-compara-gene-tree)<a href="https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/ensembl-compara-gene-tree"><img src="https://agentmods.dev/badge/skills/agentlas-ai/agentlas-desktop/ensembl-compara-gene-tree/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/agentlas-ai/agentlas-desktop/ensembl-compara-gene-tree"><img src="https://agentmods.dev/badge/skills/agentlas-ai/agentlas-desktop/ensembl-compara-gene-tree.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00036 | $0.00210 |
| Opus 5.5 | $0.00014 | $0.00084 |
| Sonnet 5.5 | $0.00007 | $0.00042 |
| Haiku 4.5 | $0.00004 | $0.00021 |
Grade A, and why
ensembl-compara-gene-tree scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
What it actually says
Ensembl Compara gene tree
- Resolve one extant Ensembl stable gene ID and reference species.
- Ask which extant NCBI taxon should prune the returned tree and whether protein or cDNA is required.
- Call
build_comparative_genomics_gene_treeand retain both the Ensembl data-release Source and gene-tree Source. - Inspect duplication and gene-split nodes before treating any sequence as a one-to-one ortholog.
- Treat the provider alignment and rooted gene tree as inferred, not observed ancestry.
- The root is the MRCA of the returned extant lineages. Never rename it as a named extinct terminal species.
- If the user needs publication-grade ASR, create a later local alignment/model/topology sensitivity plan. This workflow does not emit ancestral sequences.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 1mo ago First seen · 15 lines · 36 tokens per session scan A b5c00bbcb4fe
ensembl-compara-gene-tree is a skill published in the GitHub repository agentlas-ai/agentlas-desktop (6 stars, last pushed yesterday), licensed Apache-2.0. It adds 36 tokens to every session and 210 once invoked, about $0.0001 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-04.
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