clinical_article_ingestion

clinical_article_ingestion is a skill for Claude Code, Codex from Bokai-Zhao/Pathology-Wiki. It costs 0 tokens per session (762 once invoked), scanned A, original, no licence file.

A skill for extracting clinical information from research articles about disease definitions, diagnostic rules, biomarkers, or study groups. Clinical information concerns how illnesses are identified and studied in patients.

In plain words
What is it for?
Pulling out details about diagnostic criteria, biomarkers, pathology, and the design of patient-group studies.
Why use it?
It helps turn articles focused on clinical pathology or diagnosis into a consistent set of relevant fields.

Skill for Claude CodeCodex

Which agent this was written for is unclear — body not stored (licence); the path alone says nothing.

Good fit Pulling out details about diagnostic criteria, biomarkers, pathology, and the design of patient-group studies.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/bokai-zhao/pathology-wiki/clinical_article_ingestion
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add Bokai-Zhao/Pathology-Wiki --skill clinical_article_ingestion
Clone the repo
git clone --depth 1 https://github.com/Bokai-Zhao/Pathology-Wiki

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for clinical_article_ingestion

README.md
[![agentmods](https://agentmods.dev/badge/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion/github.svg)](https://agentmods.dev/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion)
Your own site
<a href="https://agentmods.dev/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion"><img src="https://agentmods.dev/badge/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for clinical_article_ingestion

Your own site · 80×15
<a href="https://agentmods.dev/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion"><img src="https://agentmods.dev/badge/skills/bokai-zhao/pathology-wiki/clinical_article_ingestion.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 0 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 762 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00000 $0.00762
Opus 5.5 $0.00000 $0.00305
Sonnet 5.5 $0.00000 $0.00152
Haiku 4.5 $0.00000 $0.00076

Measured 2mo ago against content hash 9616e2f5adab, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

clinical_article_ingestion scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2mo ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/articles/clinical_article_ingestion/SKILL.md · 64 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 2mo ago First seen · 64 lines · 0 tokens per session scan A 9616e2f5adab

Subscribe to this mod's changes

clinical_article_ingestion is a skill published in the GitHub repository Bokai-Zhao/Pathology-Wiki (4 stars, last pushed 5mo ago), with no licence file. It costs nothing until one of its globs matches a file; then it loads 762 tokens. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

Related

clinical_article_ingestion compared with skills from other repositories

clinical_article_ingestion next to 6 skills from other repositories
ModTypeStarsLast pushLicenceScanTokensWorks with
clinical_article_ingestionBokai-Zhao/Pathology-WikiSkill45mo agononeA0Claude Code, Codex
instrument-data-to-allotropeanthropics/knowledge-work-pluginsSkill35k3d agoApache-2.0A123Claude Code
exploratory-data-analysisK-Dense-AI/scientific-agent-skillsSkill56k4d agoMITA83Claude Code
matlabK-Dense-AI/scientific-agent-skillsSkill56k4d agoMITA44Claude Code
phylogeneticsK-Dense-AI/scientific-agent-skillsSkill56k4d agoMITA71Claude Code, Codex
research-engineerdavila7/claude-code-templatesSkill33kyesterdayMITA43Claude Code, Codex
mapping-to-snomedmaziyarpanahi/openmedSkill5.8kyesterdayApache-2.0A205Claude Code