SutroYaro: Skill for Claude Code

.claude/skills/run-experiment/SKILL.md

run-experiment is a skill for Claude Code from cybertronai/SutroYaro. It costs 21 tokens per session (687 once invoked), scanned A, original, Unlicense.

A protocol for running new machine-learning experiments, covering experiment setup, execution, recorded results, and verification with another random seed.

In plain words
What is it for?
Use it to choose a new method or configuration, create an experiment file, record accuracy and other measurements with the environment, and verify the result.
Why use it?
It helps keep experiments reproducible and prevents repeating work or trusting results that only appear under one random setup.

Skill for Claude Code

Written for Claude Code: installed under .claude/.

This is cybertronai/SutroYaro's own configuration. It tells Claude Code how to work on SutroYaro itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything SutroYaro configures →

Reuse

Borrowing it

Nothing to install: this file belongs to cybertronai/SutroYaro. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/cybertronai/SutroYaro/main/.claude/skills/run-experiment/SKILL.md
Clone the repo
git clone --depth 1 https://github.com/cybertronai/SutroYaro

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for run-experiment

README.md
[![agentmods](https://agentmods.dev/badge/skills/cybertronai/sutroyaro/run-experiment.svg)](https://agentmods.dev/skills/cybertronai/sutroyaro/run-experiment)
Your own site
<a href="https://agentmods.dev/skills/cybertronai/sutroyaro/run-experiment"><img src="https://agentmods.dev/badge/skills/cybertronai/sutroyaro/run-experiment.svg" alt="Measured on agentmods" height="20"></a>
Per session 21 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 687 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00021 $0.00687
Opus 5 $0.00010 $0.00344
Sonnet 5 $0.00004 $0.00137
Haiku 4.5 $0.00002 $0.00069

Measured 7d ago against content hash fa707af75120, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

run-experiment scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 7d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude/skills/run-experiment/SKILL.md · 58 lines

How it starts

The opening of the file, as written. The whole thing — 58 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Run Experiment

Experiment types

New method: not in the registry (search_space.yaml). Create a new experiment file from the template. Add the method to the registry if it works.

Existing method, new config: method is in the registry but you're testing a different configuration (different n, k, hyperparameters). Use the existing experiment code or copy and modify.

Either way, the steps and output format are the same.

Steps

  1. Read DISCOVERIES.md. Check what's already proven. Do not repeat existing experiments.

  2. Identify the hypothesis. Either from TODO.md, research/questions.yaml, or the user's request. State it as: "If we do X, then Y will happen because Z."

  3. Create the experiment file. Copy src/sparse_parity/experiments/_template.py. Change one variable from the baseline.

  4. Run the experiment. Capture results including accuracy, ARD, DMC, wall time. Record seed, config, environment (Python version, numpy version, OS, git hash).

  5. Save Phase 1 output. Write results/{exp_id}/results.json with raw numbers, config, and environment. No interpretation in this file.

  6. Verify. Re-run with a different seed. If the result only holds on one seed, note that.

  7. Write Phase 2 findings. Create docs/findings/{exp_id}.md using the template from LAB.md. Use Status: SUCCESS | PARTIAL | FAILED (not "COMPLETED"). Reference the results JSON. Add analysis and impact.

  8. Classify in research/log.jsonl. Use "class": "WIN" only if the result is a clear improvement. Use "PARTIAL" for mixed results. Use "LOSS" for negative results. All three are valid findings.

  9. Update DISCOVERIES.md if the finding answers an open question or establishes a new fact.

After merge: changelog and reporting

Not every experiment needs a changelog entry. After a PR is merged, the reviewing agent decides:

  • Add to changelog if the result changes the best known method, maps a new frontier, answers an open question from DISCOVERIES.md, or is the first contribution from a new researcher.
  • Skip changelog if the result confirms what's already known or is a minor null result.

Read the full file on GitHub · 58 lines

Files

What ships with it

2 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 7d ago First seen · 58 lines · 21 tokens per session scan A fa707af75120

Subscribe to this mod's changes

run-experiment is a skill published in the GitHub repository cybertronai/SutroYaro (16 stars, last pushed 3mo ago), licensed Unlicense. It adds 21 tokens to every session and 687 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Related

Other skills, from other repositories

physicsnemo-discover

Official NVIDIA-authored guidance for navigating PhysicsNeMo — pick the model, datapipe, or example for a SciML/AI4Science task (surrogates, forecasting, downscaling, physics-informed, inverse, generative). Points at existing files via live repo search; never writes code. Do NOT use for installation or environment…

NVIDIA/physicsnemo · 124 tokens

pysr

Use when fitting equations to data with PySR or SymbolicRegression.jl, when a user wants an interpretable formula, symbolic model, scaling law, or empirical relation discovered from numeric data, or when debugging a PySR search that is slow, stuck, or giving poor equations.

astroautomata/PySR · 61 tokens

esmfold2

Biohub ESMFold2 / ESMFold2-Fast all-atom co-folding (Candido et al. 2026, github.com/Biohub/esm). Single-sequence and MSA modes; protein, DNA, RNA, ligand (CCD/SMILES), modified residues. FoldBench Ab-Ag 50-55%, PPI 70-77% DockQ-pass. Also covers the ESMC-{300M,600M,6B} protein language models from the same release…

aipoch/open-science · 223 tokens

scgpt

Embed and annotate single-cell expression data with scGPT, a foundation model for single-cell biology. Use this skill when: (1) Producing cell embeddings from an AnnData for clustering/integration, (2) Zero-shot or fine-tuned cell-type annotation, (3) Gene-level representation for perturbation/GRN tasks. For…

aipoch/open-science · 89 tokens

evo2

Score, embed, and generate DNA sequences with Evo 2, a long-context genomic foundation model. Use this skill when: (1) Computing per-nucleotide or per-sequence likelihoods for variant effect scoring, (2) Embedding genomic windows for downstream classification, (3) Generating DNA conditioned on a prefix, (4) Scoring…

aipoch/open-science · 83 tokens

ml-training-recipes

Battle-tested PyTorch training recipes for all domains — LLMs, vision, diffusion, medical imaging, protein/drug discovery, spatial omics, genomics. Covers training loops, optimizer selection (AdamW, Muon), LR scheduling, mixed precision, debugging, and systematic experimentation. Use when training or fine-tuning…

Orchestra-Research/AI-Research-SKILLs · 88 tokens