Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add GGbond-bo/MemOmics-Agent --skill drug-responsegit clone --depth 1 https://github.com/GGbond-bo/MemOmics-AgentWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/ggbond-bo/memomics-agent/drug-response)<a href="https://agentmods.dev/skills/ggbond-bo/memomics-agent/drug-response"><img src="https://agentmods.dev/badge/skills/ggbond-bo/memomics-agent/drug-response/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/ggbond-bo/memomics-agent/drug-response"><img src="https://agentmods.dev/badge/skills/ggbond-bo/memomics-agent/drug-response.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00016 | $0.02391 |
| Opus 5 | $0.00008 | $0.01196 |
| Sonnet 5 | $0.00003 | $0.00478 |
| Haiku 4.5 | $0.00002 | $0.00239 |
Grade A, and why
drug-response scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 204 lines — stays where its author put it; the contents beside it link to each section on GitHub.
药物响应预测
Connectivity Map+药物敏感性+联合用药预测
适用场景: disease, tumor, 有药敏数据
分析步骤:
- Connectivity Map: cmapPy gene set enrichment
- Drug sensitivity prediction: oncoPredict IC50
- Combination therapy: DrugComb synergy
依赖包: pRRophetic, cmapPy, oncoPredict, GSVA
难度: advanced
触发提示: "预测药物响应"
When to Use
适用于: disease, tumor, 有药敏数据
Pipeline
- Connectivity Map
- cmapPy gene set enrichment
- Tool:
terminal
- Drug sensitivity prediction
- oncoPredict IC50
- Tool:
terminal
- Combination therapy
- DrugComb synergy
- Tool:
terminal
Parameters
| Parameter | Default | Notes |
|---|---|---|
r_packages |
pRRophetic, oncoPredict, GSVA | |
python_packages |
cmapPy | |
steps |
Connectivity Map -> Drug sensitivity prediction -> Combination therapy |
Parameter Adaptation: Adjust parameters based on tissue quality, species, and condition. Literature values take priority, then official defaults, then tissue-specific adjustments.
Proven Scripts
Scripts that have been successfully executed and passed analysis review. These are automatically saved after successful runs.
| Species | Tissue | Condition | Date | Score |
|---|---|---|---|---|
| (none yet) |
Common Issues
| Error | Cause | Solution |
|---|---|---|
| (accumulated from runs) |
References
- Source: MemOmics built-in
- Category: drug_discovery
- Language: Python
🗣️ 辩论机制(debate_analysis)
本 skill 在执行后,如果涉及参数选择、方法决策、结果判断等不确定环节,必须调用 工具进行多角色辩论。
辩论规则
- 正方 3 位专业编辑(各自独立,互相看不到):生物学编辑 / 统计学编辑 / 生信编辑
- 反方 4 位专业编辑(各自独立,互相看不到,也看不到正方):生物学编辑 / 统计学编辑 / 生信编辑 / 历史经验编辑
- 裁判:看到所有 7 方论点后给出裁决 + 置信度(高/中/低)
- 上下文隔离:每个编辑是独立的 LLM API 调用,messages 只包含自己的 prompt
触发场景
- 参数选择有多个合理选项时(如分辨率 0.4 vs 0.6 vs 0.8)
- 结果可能受方法选择影响时(如不同注释方法给出不同结果)
- 生物结论需要验证可靠性时
- QC 阈值不确定时(如 MT% 阈值 10% vs 15% vs 20%)
What ships with it
2 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 9d ago First seen · 204 lines · 16 tokens per session scan A 5f26aae34dc0
drug-response is a skill published in the GitHub repository GGbond-bo/MemOmics-Agent (19 stars, last pushed 2d ago), licensed MIT. It adds 16 tokens to every session and 2,391 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.
Other skills, from other repositories
arboreto
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for…
pyhealth
Build clinical/healthcare deep-learning pipelines with PyHealth — loading EHR/signal/imaging datasets (MIMIC-III/IV, eICU, OMOP, SleepEDF, ChestXray14, EHRShot), defining tasks (mortality, readmission, length-of-stay, drug recommendation, sleep staging, ICD coding, EEG events), instantiating models (Transformer…
torchdrug
Build and troubleshoot TorchDrug 0.2.1 workflows for molecular graphs, property prediction, self-supervised pretraining, molecule generation, retrosynthesis, protein representation learning, and knowledge graph reasoning. Use when code imports torchdrug or needs its datasets, models, tasks, or Engine.
deepspot-m
Generate transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M. Use when you need spatial gene expression in log1p-CPM for 224x224 tiles at about 20x, want to query protein-coding genes by symbol instead of a fixed panel, or want to run prediction across a whole slide after tiling with…
nemo-mbridge-perf-expert-parallel-overlap
Validate and use MoE expert-parallel communication overlap in Megatron-Bridge, including overlapmoeexpertparallelcomm, delaywgradcompute, and flex dispatcher backends such as DeepEP and HybridEP.
pick-a-pii-model
Select an on-device OpenMed PII model from the committed registry by language, runtime format, and size budget, then require recall validation before deployment. Use when an agent must choose a local PII detector for CPU, Apple Silicon, or a mobile export without relying on live model discovery.