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borzoi

borzoi is a skill for Claude Code, Codex from JimLiu/science-skills. It costs 79 tokens per session (1,074 once invoked), scanned A, original, no licence file.

A genome-analysis tool that predicts biological activity tracks from DNA sequence. These tracks represent signals such as RNA production, gene regulation, open DNA, and protein binding.

In plain words
What is it for?
Use it to score a variant, predict activity across a genomic region, or rank non-coding variants by their predicted effects.
Why use it?
It helps estimate how DNA variants, including variants outside genes, may change gene activity or other regulatory signals.

Skill for Claude CodeCodex

Which agent this was written for is unclear — body not stored (licence); the path alone says nothing.

not rated 229repo +1 changed 8d ago A scan 79 tokens no licence

Good fit Use it to score a variant, predict activity across a genomic region, or rank non-coding variants by their predicted effects.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/jimliu/science-skills/borzoi
View source ↗ JimLiu/science-skills
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add JimLiu/science-skills --skill borzoi
Clone the repo
git clone --depth 1 https://github.com/JimLiu/science-skills

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for borzoi

README.md
[![agentmods](https://agentmods.dev/badge/skills/jimliu/science-skills/borzoi/github.svg)](https://agentmods.dev/skills/jimliu/science-skills/borzoi)
Your own site
<a href="https://agentmods.dev/skills/jimliu/science-skills/borzoi"><img src="https://agentmods.dev/badge/skills/jimliu/science-skills/borzoi/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for borzoi

Your own site · 80×15
<a href="https://agentmods.dev/skills/jimliu/science-skills/borzoi"><img src="https://agentmods.dev/badge/skills/jimliu/science-skills/borzoi.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 79 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,074 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00079 $0.01074
Opus 5.5 $0.00032 $0.00430
Sonnet 5.5 $0.00016 $0.00215
Haiku 4.5 $0.00008 $0.00107

Measured 8d ago against content hash a6b87d906c21, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

borzoi scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/borzoi/SKILL.md · 103 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 8d ago Changed a6b87d906c21
  2. 2mo ago First seen · 103 lines · 79 tokens per session scan A 138b38790b1a

Subscribe to this mod's changes

borzoi is a skill published in the GitHub repository JimLiu/science-skills (229 stars, last pushed 8d ago), with no licence file. It adds 79 tokens to every session and 1,074 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Scientificbiomodels
Related

borzoi compared with skills from other repositories

borzoi next to 6 skills from other repositories
ModTypeStarsLast pushLicenceScanTokensWorks with
borzoiJimLiu/science-skillsSkill2298d agononeA79Claude Code, Codex
esmfold2aipoch/open-scienceSkill5.5kyesterdayApache-2.0A223Claude Code, Codex
openfold3aipoch/open-scienceSkill5.5kyesterdayApache-2.0A60Claude Code, Codex
ligandmpnnaipoch/open-scienceSkill5.5kyesterdayApache-2.0A100Claude Code, Codex
alphafold2aipoch/open-scienceSkill5.5kyesterdayApache-2.0A117Claude Code, Codex
boltzaipoch/open-scienceSkill5.5kyesterdayApache-2.0A88Claude Code, Codex
chai1aipoch/open-scienceSkill5.5kyesterdayApache-2.0A98Claude Code, Codex