clinical-decision-support

clinical-decision-support is a skill for Claude Code from jimmc414/Kosmos. It costs 97 tokens per session (5,513 once invoked), scanned A, original, no licence file.

A set of instructions for creating clinical decision-support documents for pharmaceutical and clinical research. It covers patient-group analyses based on biomarkers and treatment recommendations based on evidence and guidelines.

In plain words
What is it for?
Use it to prepare biomarker-based cohort analyses, treatment recommendation reports, evidence grades, and decision algorithms.
Why use it?
It helps make clinical reasoning explicit by connecting patient characteristics, research evidence, outcomes, and treatment choices.

Skill for Claude Code

Written for Claude Code: installed under .claude/.

Good fit Use it to prepare biomarker-based cohort analyses, treatment recommendation reports, evidence grades, and decision algorithms.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/jimmc414/kosmos/clinical-decision-support
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add jimmc414/Kosmos --skill clinical-decision-support
Clone the repo
git clone --depth 1 https://github.com/jimmc414/Kosmos

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for clinical-decision-support

README.md
[![agentmods](https://agentmods.dev/badge/skills/jimmc414/kosmos/clinical-decision-support/github.svg)](https://agentmods.dev/skills/jimmc414/kosmos/clinical-decision-support)
Your own site
<a href="https://agentmods.dev/skills/jimmc414/kosmos/clinical-decision-support"><img src="https://agentmods.dev/badge/skills/jimmc414/kosmos/clinical-decision-support/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for clinical-decision-support

Your own site · 80×15
<a href="https://agentmods.dev/skills/jimmc414/kosmos/clinical-decision-support"><img src="https://agentmods.dev/badge/skills/jimmc414/kosmos/clinical-decision-support.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 97 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 5,513 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00097 $0.05513
Opus 5.5 $0.00039 $0.02205
Sonnet 5.5 $0.00019 $0.01103
Haiku 4.5 $0.00010 $0.00551

Measured 1mo ago against content hash 8260c6c88caa, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

clinical-decision-support scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.

The scan reads SKILL.md. This mod also ships 5 executable files (scripts/biomarker_classifier.py, scripts/build_decision_tree.py, scripts/create_cohort_tables.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

kosmos-reference/kosmos-claude-scientific-writer/.claude/skills/clinical-decision-support/SKILL.md · 466 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 1mo ago First seen · 466 lines · 97 tokens per session scan A 8260c6c88caa

Subscribe to this mod's changes

clinical-decision-support is a skill published in the GitHub repository jimmc414/Kosmos (595 stars, last pushed 7d ago), with no licence file. It adds 97 tokens to every session and 5,513 once invoked, about $0.0004 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

Related

Other skills, from other repositories

clinical-case-report

Structured medical case presentation for clinical rounds, conferences, and documentation. Generates SOAP-format or narrative case reports with physiologically accurate vitals, labs, and evidence-based plans. Use when the brief mentions "case report", "case presentation", "SOAP note", "clinical case", "ward rounds"…

nexu-io/open-design · 73 tokens

instrument-data-to-allotrope

Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this skill when scientists need to standardize instrument data for LIMS systems, data lakes, or downstream analysis. Supports auto-detection of instrument types. Outputs include full…

anthropics/knowledge-work-plugins · 123 tokens

pydicom

Reads, inspects, writes, transforms, and preflights local DICOM datasets and pixel data. Applies to DICOM metadata, transfer syntaxes, compression plugins, frames, private elements, JSON, and bounded de-identification review.

K-Dense-AI/scientific-agent-skills · 52 tokens

nature-paper-trans

A workflow for translating selected pages or a complete English research-paper PDF into a simplified-Chinese, image-based PDF. bioRxiv is not mentioned in the provided details; the workflow applies to research-paper PDFs generally.

Yuan1z0825/nature-skills · 68 tokens

nature-experiment-log

A workflow for turning experiment notes, images, audio, or text into structured Markdown laboratory logs with YAML metadata. It can also organize raw attachments and optionally connect the logs to Feishu or Obsidian.

Yuan1z0825/nature-skills · 45 tokens

parsing-ccda-documents

Parses C-CDA / CCD XML clinical documents to extract human-readable section narrative plus coded entries, keyed by section LOINC codes and templateIds. Use before OpenMed processing when ingesting C-CDA R2.1 documents (CCD, Discharge Summary, H&P, Consultation Note) exported from an EHR and you need the narrative…

maziyarpanahi/openmed · 152 tokens