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jmschrei/ledidi

Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.

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ledidi

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jmschrei/ledidi

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Use for any task involving the ledidi library — gradient-based design of minimal edits to categorical sequences (DNA/RNA/protein) so that a frozen oracle model predicts a desired output. Triggers on designing or editing a sequence, inserting or knocking out a motif or binding site, hitting a target model output, cell…

112 5d ago A 126 tokens original Apache-2.0