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jmschrei/tangermeme

Biological sequence analysis for the modern age.

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tangermeme

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jmschrei/tangermeme

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Use for any task involving the tangermeme library — post-training analysis of genomic sequence-to-function (S2F) deep learning models. Triggers on predictions, DeepLIFT/SHAP attributions, saliency, PISA, dependency maps, marginalization/ablation/spacing of motifs, saturation mutagenesis (ISM), variant effect scoring…

not rated 329 +5 changed 4d ago A SkillSpector: pass 147 tokens original MIT