claude-scientific-writer: Skill for Claude Code

.claude/skills/scientific-schematics/SKILL.md

scientific-schematics is a skill for Claude Code from K-Dense-AI/claude-scientific-writer. It costs 67 tokens per session (3,433 once invoked), scanned A, a copy of scientific-schematics, MIT.

A workflow for creating publication-quality scientific diagrams from a natural-language description. It covers visuals such as neural-network architectures, system diagrams, flowcharts, and biological pathways, then reviews the generated image against the chosen document type.

In plain words
What is it for?
Use it to create figures for journal papers, conference submissions, theses, grants, preprints, reports, posters, and presentations.
Why use it?
It turns complex scientific ideas into diagrams without requiring manual drawing or diagram-specific code, while checking whether the result meets a publication standard.

Skill for Claude Code

Written for Claude Code: allowed-tools in frontmatter. Also seen: built for openclaw.

This is K-Dense-AI/claude-scientific-writer's own configuration. It tells Claude Code how to work on claude-scientific-writer itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything claude-scientific-writer configures →

About the project

Claude Scientific Writer is an AI-assisted research and writing tool that searches literature and produces documents such as scientific papers, reports, posters, grant proposals, and reviews with citations. Researchers and technical writers can use it as a Claude Code plugin, Python package, or command-line tool, with the catalogue entries defining agent workflows for it.

K-Dense-AI/claude-scientific-writer · 2,327 stars · on GitHub · k-dense.ai

Reuse

Borrowing it

Nothing to install: this file belongs to K-Dense-AI/claude-scientific-writer. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/K-Dense-AI/claude-scientific-writer/main/.claude/skills/scientific-schematics/SKILL.md
Clone the repo
git clone --depth 1 https://github.com/K-Dense-AI/claude-scientific-writer

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for scientific-schematics

README.md
[![agentmods](https://agentmods.dev/badge/skills/k-dense-ai/claude-scientific-writer/scientific-schematics/github.svg)](https://agentmods.dev/skills/k-dense-ai/claude-scientific-writer/scientific-schematics)
Your own site
<a href="https://agentmods.dev/skills/k-dense-ai/claude-scientific-writer/scientific-schematics"><img src="https://agentmods.dev/badge/skills/k-dense-ai/claude-scientific-writer/scientific-schematics/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for scientific-schematics

Your own site · 80×15
<a href="https://agentmods.dev/skills/k-dense-ai/claude-scientific-writer/scientific-schematics"><img src="https://agentmods.dev/badge/skills/k-dense-ai/claude-scientific-writer/scientific-schematics.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 67 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 3,433 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin 91% copy Near-identical to another mod in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00067 $0.03433
Opus 5 $0.00034 $0.01716
Sonnet 5 $0.00013 $0.00687
Haiku 4.5 $0.00007 $0.00343

Measured 12d ago against content hash 348e3dab3acb, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-11, from the pricing page.

Security

Grade A, and why

scientific-schematics scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 12d ago.

The scan reads SKILL.md. This mod also ships 3 executable files (scripts/example_usage.sh, scripts/generate_schematic_ai.py, scripts/generate_schematic.py), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

This is a copy

91% identical to scientific-schematics — 278 lines differ, which has more behind it and is treated as the original. This page carries a canonical link to it rather than competing with it.

.claude/skills/scientific-schematics/SKILL.md · 383 lines

How it starts

The opening of the file, as written. The whole thing — 383 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Scientific Schematics and Diagrams

Overview

Scientific schematics and diagrams transform complex concepts into clear visual representations for publication. This skill uses Nano Banana 2 AI for diagram generation with Gemini 3.6 Flash quality review.

How it works:

  • Describe your diagram in natural language
  • Nano Banana 2 generates publication-quality images automatically
  • Gemini 3.6 Flash reviews quality against document-type thresholds
  • Smart iteration: Only regenerates if quality is below threshold
  • Publication-ready output in minutes
  • No coding, templates, or manual drawing required

Quality Thresholds by Document Type:

Document Type Threshold Description
journal 8.5/10 Nature, Science, peer-reviewed journals
conference 8.0/10 Conference papers
thesis 8.0/10 Dissertations, theses
grant 8.0/10 Grant proposals
preprint 7.5/10 arXiv, bioRxiv, etc.
report 7.5/10 Technical reports
poster 7.0/10 Academic posters
presentation 6.5/10 Slides, talks
default 7.5/10 General purpose

Simply describe what you want, and Nano Banana 2 creates it. All diagrams are stored in the figures/ subfolder and referenced in papers/posters.

Quick Start: Generate Any Diagram

Create any scientific diagram by simply describing it. Nano Banana 2 handles everything automatically with smart iteration:

# Generate for journal paper (highest quality threshold: 8.5/10)
python scripts/generate_schematic.py "CONSORT participant flow diagram with 500 screened, 150 excluded, 350 randomized" -o figures/consort.png --doc-type journal

# Generate for presentation (lower threshold: 6.5/10 - faster)
python scripts/generate_schematic.py "Transformer encoder-decoder architecture showing multi-head attention" -o figures/transformer.png --doc-type presentation

# Generate for poster (moderate threshold: 7.0/10)
python scripts/generate_schematic.py "MAPK signaling pathway from EGFR to gene transcription" -o figures/mapk_pathway.png --doc-type poster

# Custom max iterations (max 2)
python scripts/generate_schematic.py "Complex circuit diagram with op-amp, resistors, and capacitors" -o figures/circuit.png --iterations 2 --doc-type journal

Read the full file on GitHub · 383 lines

Files

What ships with it

7 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 12d ago First seen · 383 lines · 67 tokens per session scan A 348e3dab3acb

Subscribe to this mod's changes

scientific-schematics is a skill published in the GitHub repository K-Dense-AI/claude-scientific-writer (2,327 stars, last pushed 23d ago), licensed MIT. It adds 67 tokens to every session and 3,433 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. It is 91% identical to scientific-schematics, differing in 278 lines, and is treated as a copy.

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