analyze-data

analyze-data is a skill for Claude Code from kenlkehl/onc-data-wrangler-plugin. It costs 63 tokens per session (11,802 once invoked), scanned A, original, no licence file.

An interactive Python analysis skill for oncology data, including tables, survival analysis, statistical models, and specialist cancer research knowledge. Oncology is the study and treatment of cancer.

In plain words
What is it for?
Use it to analyze raw files or DuckDB databases, examine survival outcomes, run statistical models, and explore oncology data.
Why use it?
It lets users explore cancer datasets with Python when SQL queries alone are not the right fit.

Skill for Claude Code

Written for Claude Code: allowed-tools in frontmatter. Also seen: model in frontmatter.

Part of the onc-data-wrangler plugin — 14 skills, 11 agents shipped together

Good fit Use it to analyze raw files or DuckDB databases, examine survival outcomes, run statistical models, and explore oncology data.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/kenlkehl/onc-data-wrangler-plugin/analyze-data
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add kenlkehl/onc-data-wrangler-plugin --skill analyze-data
Clone the repo
git clone --depth 1 https://github.com/kenlkehl/onc-data-wrangler-plugin

Made for: Claude Code.

Or install onc-data-wrangler, the plugin that ships this one along with the rest of its 14 skills, 11 agents.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for analyze-data

README.md
[![agentmods](https://agentmods.dev/badge/skills/kenlkehl/onc-data-wrangler-plugin/analyze-data.svg)](https://agentmods.dev/skills/kenlkehl/onc-data-wrangler-plugin/analyze-data)
Your own site
<a href="https://agentmods.dev/skills/kenlkehl/onc-data-wrangler-plugin/analyze-data"><img src="https://agentmods.dev/badge/skills/kenlkehl/onc-data-wrangler-plugin/analyze-data.svg" alt="Measured on agentmods" height="20"></a>
Per session 63 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 11,802 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 1 finding. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00063 $0.11802
Opus 5 $0.00032 $0.05901
Sonnet 5 $0.00013 $0.02360
Haiku 4.5 $0.00006 $0.01180

Measured 7d ago against content hash cf246e644556, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

analyze-data scanned grade A with 1 finding against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 7d ago.

The scan reads SKILL.md. This mod also ships 5 executable files (recipes/scanpy/celltypist_annotate.py, recipes/scanpy/hvg_leiden.py, recipes/scanpy/infercnv.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Runs shell commandslowCapability

Expected in a hook, worth knowing in a rule or an instructions file.

out = subprocess.run([rscript, "-e", probe], capture_output=True, text=True, timeout=60)
skills/analyze-data/SKILL.md · 1,079 lines

The source is not reproduced here

A licence we could not identify

The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 7d ago First seen · 1,079 lines · 63 tokens per session scan A cf246e644556

Subscribe to this mod's changes

analyze-data is a skill published in the GitHub repository kenlkehl/onc-data-wrangler-plugin (5 stars, last pushed 2mo ago), with no licence file. It adds 63 tokens to every session and 11,802 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 1 finding (runs shell commands). No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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