Precision Medicine MCP Platform: A set of bioinformatics servers + tools - production multiomics/genomics + spatial transcriptomics. Examples for ovarian cancer, breast cancer and preventative cardiovascular conditions
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Audits all Markdown files in the precision-medicine-mcp repo against six canonical principles: (A) server Python code is the authoritative tool count, (B) server-registry.md is the authoritative server/tool summary, (C) all three patient outcomes (PAT001/PAT002/PAT003) must be represented consistently, (D) no content…
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Ensures all development meets clinical compliance and security standards. Focuses on HIPAA-friendly logging, audit trails, risk assessment, and scientific nomenclature.
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Guide for managing patient data and bioinformatics datasets (h5ad, CSV). Standardizes data loading, preprocessing, and path management.
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Expert guide for project-specific documentation and clinical reporting. Maintains consistency across persona-based guides and automated reports.
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Expert guide for GCP deployment, security, and hospital-specific infrastructure. Covers Cloud Run, IAM, VPC, and secrets management for bioinformatics.
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Expert guide for testing bioinformatics MCP servers. Covers pytest, DRYRUN modes, and PatientOne simulation scenarios.
lynnlangit/precision-medicine-mcp
Skill Claude CodeCodex
Expert guide for developing the Precision Medicine Streamlit dashboard and LLM providers. Covers provider abstraction, trace visualization, and UI components.