A framework for discovering, compiling, and validating reusable skills for scientific agents.
Skill Claude CodeCodex
Use this starter when a task lands in the PDE / CFD simulation workflows frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Scientific time-series anomaly detection frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Spectroscopy and signal extraction frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Symbolic discovery of physical laws frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Differential proteomics frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to fetch a compact accession summary from the EBI Proteins API. Do not use it for bulk downloads, unsupported endpoints, or full protein annotation export.
Skill Claude CodeCodex
Use this starter when a task lands in the Interface analysis frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to fetch a protein family or domain entry from the official InterPro API and summarize its key metadata.
Skill Claude CodeCodex
Use this starter when a task lands in the MS proteomics preprocessing frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to search PRIDE Archive v2 proteomics projects by keyword and return compact dataset-discovery summaries. Do not use it for raw file download orchestration or unsupported PRIDE endpoints.
Skill Claude CodeCodex
Use this starter when a task lands in the Protein embeddings frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Protein identification / quantification frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to validate protein FASTA inputs, extract deterministic smoke-safe embeddings, and run a reusable sequence-to-function triage flow that can later be swapped onto real ESM-2 or ProtT5 backends.
Skill Claude CodeCodex
Use this starter when a task lands in the Protein structure cross-links frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the PTM analysis frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Sequence-to-function modeling frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to fetch a UniProtKB accession from the official UniProt REST API and summarize its sequence features into compact JSON.
Skill Claude CodeCodex
Use this starter when a task lands in the Conda / Mamba / Pixi / uv frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to author and run a minimal Common Workflow Language CommandLineTool and one-step workflow with cwltool. Do not use it for containerized production execution or complex scatter/gather workflows.
Skill Claude CodeCodex
Use this starter when a task lands in the CWL workflows frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Docker / Apptainer / Singularity frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this starter when a task lands in the Environment locking frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.
Skill Claude CodeCodex
Use this skill to generate a repository-aware GitHub Actions workflow that runs validation, site generation, tests, and a small smoke subset for this project.
Skill Claude CodeCodex
Use this skill to run a minimal Nextflow workflow through the repo-managed Java and Nextflow prefix, either locally or on the Slurm cluster. Do not use it for containerized production pipelines.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: