ginkgo-cloud-lab

ginkgo-cloud-lab is a skill for Claude Code, Codex from magic3007/dotfiles. It costs 87 tokens per session (765 once invoked), scanned A, a copy of ginkgo-cloud-lab, MIT.

A web service for submitting laboratory protocols to Ginkgo Bioworks' remote robotic lab. The lab can run listed experiments and return measurements and related results.

In plain words
What is it for?
Use it to submit cell-free protein-expression validation or optimization protocols and request feasibility and pricing for other custom workflows.
Why use it?
It allows researchers to request certain experiments remotely instead of operating the laboratory equipment themselves.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to submit cell-free protein-expression validation or optimization protocols and request feasibility and pricing for other custom workflows.

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Install with agentmods
npx agentmods add skills/magic3007/dotfiles/ginkgo-cloud-lab
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add magic3007/dotfiles --skill ginkgo-cloud-lab
Clone the repo
git clone --depth 1 https://github.com/magic3007/dotfiles

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for ginkgo-cloud-lab

README.md
[![agentmods](https://agentmods.dev/badge/skills/magic3007/dotfiles/ginkgo-cloud-lab.svg)](https://agentmods.dev/skills/magic3007/dotfiles/ginkgo-cloud-lab)
Your own site
<a href="https://agentmods.dev/skills/magic3007/dotfiles/ginkgo-cloud-lab"><img src="https://agentmods.dev/badge/skills/magic3007/dotfiles/ginkgo-cloud-lab.svg" alt="Measured on agentmods" height="20"></a>
Per session 87 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 765 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin 98% copy Near-identical to another mod in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00087 $0.00765
Opus 5 $0.00044 $0.00382
Sonnet 5 $0.00017 $0.00153
Haiku 4.5 $0.00009 $0.00076

Measured 4d ago against content hash e5d488dd263d, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

ginkgo-cloud-lab scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 4d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

This is a copy

98% identical to ginkgo-cloud-lab — 2 lines differ, which has more behind it and is treated as the original. This page carries a canonical link to it rather than competing with it.

claude/skills/scientific-agent-skills/skills/ginkgo-cloud-lab/SKILL.md · 59 lines

How it starts

The opening of the file, as written. The whole thing — 59 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Ginkgo Cloud Lab

Overview

Ginkgo Cloud Lab (https://cloud.ginkgo.bio) provides remote access to Ginkgo Bioworks' autonomous lab infrastructure. Protocols are executed on Reconfigurable Automation Carts (RACs) -- modular units with robotic arms, maglev sample transport, and industrial-grade software spanning 70+ instruments.

The platform also includes EstiMate, an AI agent that accepts human-language protocol descriptions and returns feasibility assessments and pricing for custom workflows beyond the listed protocols.

Available Protocols

1. Cell Free Protein Expression Validation

Rapid go/no-go expression screening using reconstituted E. coli CFPS. Submit a FASTA sequence (up to 1800 bp) and receive expression confirmation, baseline titer (mg/L), and initial purity with virtual gel images.

2. Cell Free Protein Expression Optimization

DoE-based optimization across up to 24 conditions per protein (lysates, temperatures, chaperones, disulfide enhancers, cofactors). Designed for difficult-to-express and membrane proteins.

3. Fluorescent Pixel Art Generation

Transform a pixel art image (48x48 to 96x96 px, PNG/SVG) into fluorescent bacterial artwork using up to 11 E. coli strains via acoustic dispensing. Delivered as high-res UV photographs.

General Ordering Workflow

  1. Select a protocol at https://cloud.ginkgo.bio/protocols
  2. Configure parameters (number of samples/proteins, replicates, plates)
  3. Upload input files (FASTA for protein protocols, PNG/SVG for pixel art)
  4. Add any special requirements in the Additional Details field
  5. Submit and receive a feasibility report and price quote

Read the full file on GitHub · 59 lines

Files

What ships with it

3 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 4d ago First seen · 59 lines · 87 tokens per session scan A e5d488dd263d

Subscribe to this mod's changes

ginkgo-cloud-lab is a skill published in the GitHub repository magic3007/dotfiles (11 stars, last pushed today), licensed MIT. It adds 87 tokens to every session and 765 once invoked, about $0.0004 per session on Opus 5. A static security scan graded it A with 0 findings. It is 98% identical to ginkgo-cloud-lab, differing in 2 lines, and is treated as a copy.

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