manuscript-provenance

manuscript-provenance is a skill for Claude Code from Mathews-Tom/armory. It costs 70 tokens per session (4,413 once invoked), scanned A, original, MIT.

A reproducibility audit that checks whether a manuscript’s numbers, tables, figures, labels, ordering, and thresholds come from code or pipeline outputs.

In plain words
What is it for?
Use it to map each manuscript artifact to the script, configuration file, or pipeline output that generated it.
Why use it?
It finds manual edits and broken links between the paper and its analysis, which can make results difficult to reproduce.

Skill for Claude Code

Written for Claude Code: shipped in a Claude Code plugin.

Part of the armory plugin — 85 skills shipped together

Good fit Use it to map each manuscript artifact to the script, configuration file, or pipeline output that generated it.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/mathews-tom/armory/manuscript-provenance
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add Mathews-Tom/armory --skill manuscript-provenance
Clone the repo
git clone --depth 1 https://github.com/Mathews-Tom/armory

Made for: Claude Code.

Or install armory, the plugin that ships this one along with the rest of its 85 skills.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for manuscript-provenance

README.md
[![agentmods](https://agentmods.dev/badge/skills/mathews-tom/armory/manuscript-provenance/github.svg)](https://agentmods.dev/skills/mathews-tom/armory/manuscript-provenance)
Your own site
<a href="https://agentmods.dev/skills/mathews-tom/armory/manuscript-provenance"><img src="https://agentmods.dev/badge/skills/mathews-tom/armory/manuscript-provenance/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for manuscript-provenance

Your own site · 80×15
<a href="https://agentmods.dev/skills/mathews-tom/armory/manuscript-provenance"><img src="https://agentmods.dev/badge/skills/mathews-tom/armory/manuscript-provenance.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 70 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 4,413 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00070 $0.04413
Opus 5 $0.00035 $0.02207
Sonnet 5 $0.00014 $0.00883
Haiku 4.5 $0.00007 $0.00441

Measured 10d ago against content hash 54875231ce50, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

manuscript-provenance scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 10d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/manuscript-provenance/SKILL.md · 462 lines

How it starts

The opening of the file, as written. The whole thing — 462 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Manuscript Provenance Audit

Pipeline position: Phase 2a (grounding audit). Runs in parallel with manuscript-typography. Depends on: content settled after Phase 1 fixes. Produces macro manifest consumed by manuscript-review Pass 13 (Cross-Element Coherence).

Purpose

Verify that a manuscript is a faithful rendering of computational outputs. Every number, table, figure, category label, ordering, and threshold in the document must trace to a specific script, config file, or pipeline output. Manual data entry in a manuscript is a reproducibility defect.

This skill produces a provenance map — a structured report linking each manuscript artifact to its generating code — and flags every break in the chain.

Companion skill: manuscript-review audits the document as prose (structure, argumentation, citations). This skill audits whether the document content is computationally grounded. Run both for complete pre-publication coverage.

Boundary Agreement with manuscript-review

Concern manuscript-review This skill (manuscript-provenance)
Reproducibility Does the paper describe enough to reproduce? (§6) Does the code actually produce what the paper claims? (§1, §7)
Figures/Tables Legible, accessible, well-formatted? (§12) Generated by scripts, not manual entry? (§2, §3)
Rendered visuals Readable at print scale? Floats near references? (§23) Figure generation script produces correct format? (§3)
Hyperparameters Listed in the paper with rationale? (§6) Values trace to config files, not hardcoded? (§1, §8)
Code availability Statement exists in the paper? (§17) Repo URL valid, README accurate, pipeline works? (§11)
Terminology Abbreviations consistent within document? (§14) Terms match code identifiers? (§5)
Significant figures Consistent precision within document? (§12) Precision matches script output? (§2)
Figure format Appropriate format for document quality? (§12) Format generated by script, not manually exported? (§3)
Computational cost Reported in the paper? (§7) Values trace to benchmarking scripts? (§1)
Macro-prose coherence Prose framing appropriate for injected value? (§24) Value traced to code, macro manifest produced? (§4)
Cross-element consistency Prose, captions, figures, tables mutually consistent? (§24) All elements from same run/pipeline output? (§9)

Read the full file on GitHub · 462 lines

Files

What ships with it

3 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 10d ago First seen · 462 lines · 70 tokens per session scan A 54875231ce50

Subscribe to this mod's changes

manuscript-provenance is a skill published in the GitHub repository Mathews-Tom/armory (316 stars, last pushed 4d ago), licensed MIT. It adds 70 tokens to every session and 4,413 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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