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OpenHCSDev/openhcs

Typed, reproducible high-content microscopy workflows across GUI, Python, CellProfiler, Napari/Fiji, GPU, and local MCP agents.

Open on GitHub openhcsdev.github.io
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use-openhcs

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OpenHCSDev/openhcs

Skill Codex

Operate local OpenHCS microscopy workflows through the bundled MCP server. Use when Codex needs to inspect plate data, discover processing functions, author or validate pipelines, compile and execute jobs, control viewers, or interact with a running OpenHCS GUI.

not rated 6 changed 11d ago A 55 tokens original MIT