OpenHCSDev/openhcs

Typed, reproducible high-content microscopy workflows across GUI, Python, CellProfiler, Napari/Fiji, GPU, and local MCP agents.

4Stars on the repository
3Mods indexed here, across every type
2d agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown

use-openhcs

01

OpenHCSDev/openhcs

Skill Claude CodeCodex

Operate local OpenHCS microscopy workflows through the bundled MCP server. Use when Codex needs to inspect plate data, discover processing functions, author or validate pipelines, compile and execute jobs, control viewers, or interact with a running OpenHCS GUI.

4 2d ago A 55 tokens original MIT