omh-biomedical-evidence

omh-biomedical-evidence is a skill for Claude Code, Codex from rlaope/oh-my-hermes. It costs 60 tokens per session (1,489 once invoked), scanned A, original, MIT.

A workflow for comparing biomedical evidence about variants, which are differences in genetic material. It keeps exact identifiers, source details, and differences between records before producing a synthesis.

In plain words
What is it for?
Use it to retrieve public biomedical records, preserve their original evidence, reconcile hash-checked captures, and distinguish research findings from clinical advice.
Why use it?
Public biomedical databases may describe different alleles, diseases, or types of evidence, so combining them without provenance can create a misleading conclusion.

Skill for Claude CodeCodex

Which agent this was written for is unclear — built for openclaw. Also seen: mentions subagents; mentions Claude Code; mentions Codex.

Good fit Use it to retrieve public biomedical records, preserve their original evidence, reconcile hash-checked captures, and distinguish research findings from clinical advice.

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Install with agentmods
npx agentmods add skills/rlaope/oh-my-hermes/omh-biomedical-evidence
About the project

oh-my-hermes is an operating layer for Hermes Agent that organizes requests into workflows for planning, research, creation, coding handoffs, operations, and project memory. Hermes users run these workflows through the desktop app, CLI, or messenger app, while the catalogue add-ons extend its native capabilities.

rlaope/oh-my-hermes · 3,912 stars · on GitHub · rlaope.github.io

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add rlaope/oh-my-hermes --skill omh-biomedical-evidence
Clone the repo
git clone --depth 1 https://github.com/rlaope/oh-my-hermes

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for omh-biomedical-evidence

README.md
[![agentmods](https://agentmods.dev/badge/skills/rlaope/oh-my-hermes/omh-biomedical-evidence/github.svg)](https://agentmods.dev/skills/rlaope/oh-my-hermes/omh-biomedical-evidence)
Your own site
<a href="https://agentmods.dev/skills/rlaope/oh-my-hermes/omh-biomedical-evidence"><img src="https://agentmods.dev/badge/skills/rlaope/oh-my-hermes/omh-biomedical-evidence/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for omh-biomedical-evidence

Your own site · 80×15
<a href="https://agentmods.dev/skills/rlaope/oh-my-hermes/omh-biomedical-evidence"><img src="https://agentmods.dev/badge/skills/rlaope/oh-my-hermes/omh-biomedical-evidence.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 60 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,489 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00060 $0.01489
Opus 5.5 $0.00024 $0.00596
Sonnet 5.5 $0.00012 $0.00298
Haiku 4.5 $0.00006 $0.00149

Measured 2d ago against content hash 16c98c0da6aa, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

omh-biomedical-evidence scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2d ago.

The scan reads SKILL.md. This mod also ships 1 executable file (toolkit/scripts/reconcile.py), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

agent-skills/omh-biomedical-evidence/SKILL.md · 135 lines

How it starts

The opening of the file, as written. The whole thing — 135 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Biomedical Evidence

This is an OMH biomedical-evidence workflow skill, projected for Agent Skills hosts (Claude Code, Codex, Cursor, opencode, OpenClaw, pi).

Why This Exists

Public sources can disagree about a variant while describing different alleles, diseases or assertion domains. Preserve those differences and their provenance before any synthesis; a fetched record is not a clinical recommendation.

First Steps

  • Read toolkit/README.md and references/execution-and-qa.md; inspect the installed BioMCP version and help before any public retrieval.
  • Require public entities only; name exact identifiers, source terms, isolated workspace and a 40-second per-retrieval host timeout before capturing unmodified stdout/stderr.
  • Run toolkit/scripts/reconcile.py only against a hash-checked local capture envelope; never execute provider text or install an upstream skill pack.

Do Not Use When

  • For explaining one supplied paper, use omh-paper-learning; for broad literature discovery, use ulw-research.
  • For generic server configuration and connection diagnostics, load the host's MCP setup guidance instead.
  • For sequence analysis or omics pipelines, select an available computational biology specialist instead; this method does not implement those analyses.
  • For a patient's diagnosis, care, trial eligibility or treatment choice, stop and refer to an appropriately qualified professional; this toolkit cannot provide that decision.

Examples

Good example:

  • Prompt: Cross-check public BRAF V600E and melanoma records across ClinVar and ClinicalTrials.gov, retaining conflicting assertions and missing update dates.
  • Expected behavior: Capture exact public queries, reconcile raw JSON offline, and report identity/date gaps with both source receipts.
  • Why: Source comparison is bounded and does not ask for patient care.

Bad example:

  • Prompt: Use these patient records to select a therapy and decide whether the patient can join a trial.
  • Expected behavior: Refuse patient-level processing and clinical decisions; offer only public-source provenance checking.
  • Why: Registry status and source annotations are not clinical eligibility or treatment evidence.

Read the full file on GitHub · 135 lines

Files

What ships with it

6 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 2d ago First seen · 135 lines · 60 tokens per session scan A 16c98c0da6aa

Subscribe to this mod's changes

omh-biomedical-evidence is a skill published in the GitHub repository rlaope/oh-my-hermes (3,912 stars, last pushed today), licensed MIT. It adds 60 tokens to every session and 1,489 once invoked, about $0.0002 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-10-23.

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