connectome-analysis

connectome-analysis is a skill for Claude Code, Codex from xjtulyc/awesome-rosetta-skills. It costs 35 tokens per session (4,125 once invoked), scanned A, original, no licence file.

A tool for studying functional connectomes, which are maps of connections between brain regions. It works with connectivity matrices and measures properties such as clustering, path length, modularity, hubs, and rich-club structure.

In plain words
What is it for?
Analyzing brain connectivity matrices, finding highly connected regions, and measuring the organization of brain networks.
Why use it?
It helps turn brain-connection data into network measurements instead of requiring each metric to be calculated manually.

Skill for Claude CodeCodex

Which agent this was written for is unclear — body not stored (licence); the path alone says nothing.

Good fit Analyzing brain connectivity matrices, finding highly connected regions, and measuring the organization of brain networks.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/xjtulyc/awesome-rosetta-skills/connectome-analysis
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add xjtulyc/awesome-rosetta-skills --skill connectome-analysis
Clone the repo
git clone --depth 1 https://github.com/xjtulyc/awesome-rosetta-skills

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for connectome-analysis

README.md
[![agentmods](https://agentmods.dev/badge/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis/github.svg)](https://agentmods.dev/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis)
Your own site
<a href="https://agentmods.dev/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis"><img src="https://agentmods.dev/badge/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for connectome-analysis

Your own site · 80×15
<a href="https://agentmods.dev/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis"><img src="https://agentmods.dev/badge/skills/xjtulyc/awesome-rosetta-skills/connectome-analysis.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 35 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 4,125 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00035 $0.04125
Opus 5 $0.00017 $0.02063
Sonnet 5 $0.00007 $0.00825
Haiku 4.5 $0.00003 $0.00413

Measured 11d ago against content hash d5b3e7fa0a15, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-11, from the pricing page.

Security

Grade A, and why

connectome-analysis scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/05-neuroscience/connectome-analysis/SKILL.md · 481 lines

The source is not reproduced here

A licence we could not identify

The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 11d ago First seen · 481 lines · 35 tokens per session scan A d5b3e7fa0a15

Subscribe to this mod's changes

connectome-analysis is a skill published in the GitHub repository xjtulyc/awesome-rosetta-skills (34 stars, last pushed 5mo ago), with no licence file. It adds 35 tokens to every session and 4,125 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Related

Other skills, from other repositories

tribe-v2-bci-applied

Applied BCI research and neuro-informed content optimization using Meta's TRIBE v2 brain encoder. Predicts neural responses to media, UI, and content without brain scanners — enabling stimulus optimization, attention ranking, and BCI groundwork research. Use when: (1) Predicting neural responses to video, audio, or…

broomva/skills · 180 tokens

tribe-v2-neuroscience

In-silico neuroscience experiments using Meta's TRIBE v2 (TRansformer for In-silico Brain Experiments). Predicts fMRI cortical responses to video, audio, and text without brain scanners. Use when: (1) Designing and running virtual neuroscience experiments, (2) Predicting brain responses to stimuli, (3) Replicating…

broomva/skills · 155 tokens

tribe-v2-agent-alignment

Use Meta's TRIBE v2 brain encoder to validate cortical alignment of AI model representations (LLaMA, V-JEPA2, Wav2Vec, or any encoder) and inform model selection in the Life/Arcan agent OS stack. Use when: (1) Benchmarking whether a new model encoder aligns with human cortical processing, (2) Comparing text encoders…

broomva/skills · 178 tokens

instrument-data-to-allotrope

Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this skill when scientists need to standardize instrument data for LIMS systems, data lakes, or downstream analysis. Supports auto-detection of instrument types. Outputs include full…

anthropics/knowledge-work-plugins · 123 tokens

exploratory-data-analysis

Perform bounded, local exploratory analysis of explicitly supported scientific files. Use for redacted CSV/TSV/JSON profiles; optional NumPy, HDF5, FASTA/FASTQ, and basic image metadata inspection; missingness/leakage audits; outlier and transformation sensitivity; and rigorous EDA report scaffolds. Other domain…

K-Dense-AI/scientific-agent-skills · 83 tokens

matlab

Build, review, migrate, and safely plan MATLAB or GNU Octave numerical workflows, including arrays, tabular/time data, tests, projects, graphics, MAT files, and explicit Python interoperability.

K-Dense-AI/scientific-agent-skills · 42 tokens