Instructions for a-attia/scicomp-research-skills, covering scicomp-research-skills / agents.md, 1. what this repository is, 2. local layout (per machine), 3. how agents should consume this repository and opencode-specific consumption.
Use this skill at the start of any non-trivial session in this ecosystem -- the single biggest lever for reducing token / quota / context-window consumption and for keeping the agent productive across sessions. Make sure to load this whenever the work involves more than a few file reads, any PDF handling, multi-file…
Build and maintain a verified literature-survey corpus for a research paper -- BibTeX entries, published-manuscript PDFs, text extractions for AI consumption, per-paper survey notes (30-50 lines each), and a collection log tracking verification status and corrections. Use when starting a new paper that needs a…
Use this skill whenever a user wants to adopt the scicomp-research-skills framework on an EXISTING project (paper, software library, analysis repo) rather than starting from scratch -- OR when the agent has been asked to produce substantive project content (drafting, refactoring, planning) in a directory that has no…
Improve academic paper writing quality for ML/CV/NLP-style papers with clear section structure, paragraph flow, and reviewer-facing presentation. Use when drafting or revising Abstract, Introduction, Related Work, Method, Experiments, or Conclusion; polishing figures/tables; checking claim-support alignment; or…
Use this skill whenever a session will touch a scientific-computing codebase (numerical methods, PDE solvers, inverse problems, OED, UQ, scientific ML, or any code that produces numbers) in Python, Julia, C++, or other languages. Make sure to load this EVEN IF THE USER DOES NOT MENTION IT. Codifies eleven disciplines…