brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Main orchestration workflow for systematic literature research - search, evaluate, traverse, synthesize.
3.6k 5d ago A 22 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Collaboratively build and refine paper screening rubrics through brainstorming, test-driven development, and iterative feedback.
3.6k 5d ago A 25 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Check if medicinal chemistry papers are in ChEMBL database to access curated bioactivity data.
3.6k 5d ago A 26 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Safely remove intermediate files from completed research sessions while preserving important data.
3.6k 5d ago A 18 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Two-stage paper screening - abstract scoring then deep dive for specific data extraction.
3.6k 5d ago A 20 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Use Unpaywall API to find free full-text versions of paywalled papers.
3.6k 5d ago A 21 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
PubMed search with keyword optimization, result parsing, and metadata extraction.
3.6k 5d ago A 17 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Use parallel subagents for large-scale paper screening and deep dive analysis.
3.6k 5d ago A 20 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Smart backward and forward citation following via Semantic Scholar, with relevance filtering and deduplication.
3.6k 5d ago A 22 tokens
stat-writing
34brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
End-to-end statistical writing assistant for LaTeX - draft title/abstract/keywords, expand outlines into sections, audit manuscripts, write reviewer reports and response letters, and scaffold book manuscripts.
3.6k 5d ago A 41 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Generates publication-quality figures for ML papers from research context. Given a paper section or description, extracts system components and relationships to generate architecture diagrams via Gemini. Given experiment results or data, auto-selects chart type and generates data-driven figures via matplotlib/seaborn.…
3.6k 5d ago A 68 tokens
autoresearch
36brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Orchestrates end-to-end autonomous AI research projects using a two-loop architecture. The inner loop runs rapid experiment iterations with clear optimization targets. The outer loop synthesizes results, identifies patterns, and steers research direction. Routes to domain-specific skills for execution, supports…
3.6k 5d ago A 98 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Write publication-ready ML/AI/Systems papers for NeurIPS, ICML, ICLR, ACL, AAAI, COLM, OSDI, NSDI, ASPLOS, SOSP. Use when drafting papers from research repos, structuring arguments, verifying citations, or preparing camera-ready submissions. Includes LaTeX templates, reviewer guidelines, and citation verification…
3.6k 5d ago A 80 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Universal LaTeX document skill: create, compile, and convert any document to professional PDF with PNG previews. Supports resumes, reports, cover letters, invoices, academic papers, theses/dissertations, academic CVs, presentations (Beamer), scientific posters, formal letters, exams/quizzes, books, cheat sheets…
3.6k 5d ago A 950 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Panel data analysis with Python using linearmodels and pandas.
3.6k 5d ago A 17 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Run IV, DiD, and RDD analyses in R with proper diagnostics.
3.6k 5d ago A 20 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Run regression analyses in Stata with publication-ready output tables.
3.6k 5d ago A 16 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Create academic presentations in Beamer with professional themes.
3.6k 5d ago A 14 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Create publication-quality charts and graphs for economics papers.
3.6k 5d ago A 15 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Fetch economic data from FRED, World Bank, and other APIs.
3.6k 5d ago A 18 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Clean and transform messy data in Stata with reproducible workflows.
3.6k 5d ago A 17 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Simplify and clean up code after changes are complete. Reduces complexity, improves readability, and ensures consistency.
3.6k 5d ago A 27 tokens
brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Commit changes, push to remote, and create a pull request. Use for completing features or fixes ready for review.
3.6k 5d ago A 28 tokens
sdd
48brycewang-stanford/Auto-Empirical-Research-Skills
Skill Claude CodeCodex
Implements the Spec-Driven Development lifecycle (Intent, Requirements, Design, Tasks, Build) for structured feature development. Use when the user wants to scaffold a new feature spec, generate EARS requirements, create a technical design, break work into tasks, or check spec status. Trigger on keywords: sdd…
3.6k 5d ago A 75 tokens