Skill Claude CodeCodex
A search tool for finding statements across multiple videos by meaning rather than exact words. It returns the original wording, identifies the video and time for each claim, and notes when coverage is incomplete.
Skill Claude CodeCodex
A document-writing tool for creating and editing reports, plans, letters, contracts, guides, templates, and other shareable text documents.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A Chinese-language data-analysis workflow for uploaded Excel or CSV files. It reads the files, performs basic statistical analysis, and produces conclusions in Chinese.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A Chinese-language skill for analysing Excel or CSV files through three stages: understanding the structure, summarising the statistics, and finding notable patterns.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A data-analysis tool for Excel and CSV files. CSV is a plain-text table format, while Excel files are spreadsheet documents.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A multi-round writing-review process that cycles through criticism, rewriting, synthesis, and blind scoring. It saves each intermediate result as a separate file.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A book-illustration workflow for the guide 《图解 Skill —— AI 提效实战指南》. It finds places that need visuals, prepares illustration prompts, generates images, and writes them back into the manuscript.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A Chinese-language skill for deeply analysing source material such as articles, posts, and video scripts.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A skill for turning information such as news, reports, research papers, policy documents, product material, or links into short, clear Chinese summaries.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
An analysis tool for podcast or video interview transcripts. It extracts useful points, notable quotations, background details to verify, and material for a writing plan.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A writing aid that turns analysed podcast or video interview material into a complete interview article.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A Chinese-language outline-writing aid for technology articles based on source material such as articles, posts, or video transcripts.
JimLiu/Illustrated-Agent-Skills
Skill Claude CodeCodex
A Chinese-language weekly-report writing aid that turns a list of the week's work into a Markdown table.
Skill Claude CodeCodex
Predict protein structure for monomers and multimers with AlphaFold2 via the ColabFold runner (Mirdita et al. 2022, github.com/sokrypton/ColabFold; AlphaFold2 Jumper et al. 2021). Reach for this skill to fold a sequence or complex with the AF2/AF2-Multimer evoformer, to validate designed sequences by self-consistency…
Skill Claude CodeCodex
Structure prediction for protein, nucleic-acid, and small-molecule complexes with Boltz-2 (Passaro & Wohlwend et al. 2025, github.com/jwohlwend/boltz). Reach for this skill to validate designed binders against a target, to co-fold a protein with a SMILES or CCD ligand, or to get an open-source AlphaFold3 alternative…
Skill Claude CodeCodex
Predict genome-wide functional tracks (RNA-seq, CAGE, DNase, ChIP) from DNA sequence with Borzoi. Use this skill when: (1) Scoring the regulatory effect of a variant on expression/accessibility, (2) Generating predicted coverage tracks for a locus, (3) Prioritising non-coding variants by predicted track delta.
Skill Claude CodeCodex
Structure prediction for protein, nucleic-acid, and small-molecule complexes with the Chai-1 foundation model (Chai Discovery 2024, github.com/chaidiscovery/chai-lab). Reach for this skill to predict an antibody-antigen or protein-ligand complex from a single FASTA, to re-fold designed binders as an AlphaFold-multimer…
Skill Claude CodeCodex
Set up a compute environment on a remote provider so Claude Science jobs can run there. Covers direct SSH/conda hosts, Slurm clusters, container-via-bridge runners, and managed-API providers (Modal, GCP, RunPod). Use when standing up a new provider, porting an env to a different backend, adding a tool that needs its…
Skill Claude CodeCodex
Create, configure, and maintain custom agent profiles and author new skills via the repl tool. Use when the user wants to create an agent profile, build a custom agent, modify agent capabilities, attach or detach skills/connectors on a profile, author a skill, or inspect which connectors and tools are available. Also…
Skill Claude CodeCodex
Predict small-molecule binding poses with DiffDock-L (Corso et al. 2023/2024, github.com/gcorso/DiffDock) — blind diffusion docking that places a ligand into a protein pocket without a predefined search box and ranks the samples with a learned confidence model. Reach for this skill to dock a SMILES or SDF against a…
Skill Claude CodeCodex
Biohub ESMFold2 / ESMFold2-Fast all-atom co-folding (Candido et al. 2026, github.com/Biohub/esm). Single-sequence and MSA modes; protein, DNA, RNA, ligand (CCD/SMILES), modified residues. FoldBench Ab-Ag 50-55%, PPI 70-77% DockQ-pass. Also covers the ESMC-{300M,600M,6B} protein language models from the same release…
Skill Claude CodeCodex
Score, embed, and generate DNA sequences with Evo 2, a long-context genomic foundation model. Use this skill when: (1) Computing per-nucleotide or per-sequence likelihoods for variant effect scoring, (2) Embedding genomic windows for downstream classification, (3) Generating DNA conditioned on a prefix, (4) Scoring…
Skill Claude CodeCodex
Embed proteins with Meta AI's ESM-2 (fair-esm package). Use this skill when: (1) Extracting per-residue or per-sequence embeddings for downstream ML, (2) Masked-LM likelihood / mutation effect scoring, (3) Contact prediction from a sequence.
Skill Claude CodeCodex
Compose one publication-grade multi-panel figure. Entry from a one-line claim + data refs, OR from an existing figure via deriveoutline(png). Runs a per-figure loop: outline (12-col grid, per-panel ask + labelbudget) → fan-out one sub-agent per panel (each loads figure-style) → tile + stamp letters → adversarial…
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: