Mexregkan/claude-for-researchers
Agent Claude Code
Audits a project code THROUGH its Pipeline/ doc — reads a pipeline .md and its code together, then hunts for genuine bugs (correctness, sign/normalization, convention violations) and concrete optimizations (redundant recomputation, missing memoization, complexity blow-ups). Use to review a documented code for…
Mexregkan/claude-for-researchers
Hook Claude Code
Runs before the context is compacted, executing pre-compact.sh via bash. From Mexregkan/claude-for-researchers.
Mexregkan/claude-for-researchers
Hook Claude Code
Runs when the agent finishes a response, executing promise-checker.sh via bash. From Mexregkan/claude-for-researchers.
Mexregkan/claude-for-researchers
Settings file Claude Code
Agent settings declaring 7 hook events (comment, PreCompact, commentposttooluse, commentposttoolusewolfram) and 2 allowed tools.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
The write-side inverse of /check-pipeline and the pipeline-auditor — read a Pipeline/ doc (and/or an audit report) and EDIT the code accordingly: apply an optimization the pipeline describes, correct code the pipeline (backed by your authoritative notes) shows is wrong, or bring the code in line with the documented…
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Check that a code and its Pipeline/ .md are still compatible — that every symbol, cell number, data file, and data-flow claim in the pipeline doc still matches the current code (drift detection). Use after editing a documented notebook/engine/script, before trusting a pipeline doc, or on request ("does the pipeline…
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Format a result, derivation, or numerical value for independent verification by a second model. Use when you want a cross-check on an important or contested result.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Compile a LaTeX document and fix every error plus aesthetic issue (overfull/underfull boxes, widows, alignment, fonts) for a clean PDF and log. Use this instead of running pdflatex/latexmk manually — it avoids the latexmk stale-log trap and silent grep failures on binary log output, and it reformats rather than…
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Convert Mathematica .nb or .m files to Wolfbook .wb format so they open and run in VS Code. Use when bringing existing .nb/.m files into Wolfbook, or to make an existing .wb bridge-safe.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Sync a local git clone of a shared Overleaf project: pull collaborators' latest, check whether Overleaf has moved ahead, or (only on explicit request) publish your local edits back — without ever erasing collaborators' work.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Re-derive a contested or pushed-back claim in isolation from the definitions, to catch sycophantic capitulation. Use when a result is disputed or you suspect you changed an answer only because the user pushed back.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Propagate load-bearing changes from workbook.tex to brief.tex.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Propagate a change made in a Wolfbook .wb notebook into the paired .nb notebook so the two stay identical. Use immediately after every .wb edit.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Confirm a paper actually exists (arXiv / Semantic Scholar / OpenAlex) before citing it. Use before writing any new citation.
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Playbook for the Wolfbook MCP tools — driving the LIVE Wolfram kernel and a .wb/.nb notebook in VS Code from Claude Code (read/search/edit/run cells, evaluate expressions, checkpoint/restore kernel state, step-debug, look up symbols, find paclets, search INSPIRE/arXiv papers). Use whenever working through the Wolfbook…
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Run heavy Wolfram Language (wolframscript) computations from Claude Code reliably, and diagnose the misleading "The product exited because of a license error". Use whenever invoking wolframscript on a non-trivial computation, when a wolframscript job dies with a "license error" despite a valid license, or when Wolfram…
Mexregkan/claude-for-researchers
Skill Claude CodeCodex
Write (or refresh) a Pipeline/ .md that documents the calculation-and-code pipeline of ANY large code in the project — a notebook (.wb/.nb/.ipynb), an engine, or a script. Use when a load-bearing code has no pipeline doc yet, when a new main code is added, or when the user asks to "write the pipeline" for a file.…