openscientist-io

openscientist-io/openscientist

Skill Claude CodeCodex

Skills for querying the KBase/BERDL Datalake via the MCP REST API. Use this when users want to explore KBase databases, list tables, get schemas, sample data, or run SQL queries against the KBase data lake. Triggers on mentions of KBase, BERDL, or requests to query biological/microbiome data stored in KBase.

openscientist-io/openscientist

Skill Claude CodeCodex

Statistical analysis strategies and data exploration techniques.

openscientist-io/openscientist

Skill Claude CodeCodex

Genomics and transcriptomics analysis strategies.

openscientist-io/openscientist

Skill Claude CodeCodex

Metabolomics-specific analysis strategies and domain knowledge.

openscientist-io/openscientist

Skill Claude CodeCodex

Reference of available Phenix commands for structural biology analysis.

openscientist-io/openscientist

Skill Claude CodeCodex

Generate testable hypotheses from data patterns and literature.

openscientist-io/openscientist

Skill Claude CodeCodex

Decide what to investigate next when you have multiple options.

openscientist-io/openscientist

Skill Claude CodeCodex

Interpret statistical results and decide what to do next.

openscientist-io/openscientist

Skill Claude CodeCodex

Decide when to stop investigating and prepare final report.