pregHosh

10 mods across 1 repository, 0 stars between them.

solitarius

01

pregHosh/Solitarius-mcp

Plugin Claude Code

REINVENT4 de novo molecular design, exposed to coding agents as validated MCP tools.

0 23d ago A tokens not measured original Apache-2.0

solitarius-mcp

02

pregHosh/Solitarius-mcp

Plugin Claude Code

REINVENT4 de novo molecular design as MCP tools — sampling, transfer learning, staged RL with interactive scoring-function design, custom scoring components, and generated-molecule analysis. PREREQUISITE: build and start the GPU Docker container first (see README) — without it the tools load but every call fails.

0 23d ago A tokens not measured original Apache-2.0

reinvent4

03

pregHosh/Solitarius-mcp

MCP server Claude CodeCodexCursor +2

MCP server "reinvent4", hosted remotely, as configured in pregHosh/Solitarius-mcp.

0 23d ago A tokens not measured original Apache-2.0

analyze

04

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Evaluate and characterize a set of generated SMILES across multiple quality dimensions (physicochemical, druglikeness, scaffold diversity, structural alerts, similarity to reference). Use after sampling or RL to assess molecule quality.

0 23d ago A 45 tokens original Apache-2.0

custom-component

05

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Generate a custom scoring component plugin (comp.py) for REINVENT4 RL. Use when the user needs a scoring function not available as a built-in component.

0 23d ago A 38 tokens original Apache-2.0

job-status

06

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Check the status of a running or completed REINVENT4 job (TL or RL). Use when the user asks about job progress, status, or results.

0 23d ago A 35 tokens original Apache-2.0

rl

07

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Run reinforcement learning with REINVENT4 to optimize molecular properties via a scoring function. Use when the user wants to optimize, score, or run RL/staged learning for molecule design.

0 23d ago A 39 tokens original Apache-2.0

sample

08

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Generate molecules from a REINVENT4 prior model. Use when the user wants to sample, generate, or explore chemical space from a trained model.

0 23d ago A 32 tokens original Apache-2.0

transfer-learn

09

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Fine-tune a REINVENT4 prior model on a focused SMILES dataset (transfer learning). Use when the user wants to train, fine-tune, or adapt a model to a specific chemical series.

0 23d ago A 46 tokens original Apache-2.0

validate

10

pregHosh/Solitarius-mcp

Skill Claude CodeCodex

Validate REINVENT4 input SMILES files and TOML configs before launching jobs. Use when the user wants to check, validate, or verify their inputs.

0 23d ago A 34 tokens original Apache-2.0